PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR72852.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 250aa MW: 29225.2 Da PI: 7.8721 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.6 | 2.5e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdae+a+iifs++gklye++s RWR72852.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 90.6 | 2.9e-30 | 84 | 170 | 13 | 99 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ e+ Lk+++e Lqr+qR+llGedLe+L+ +eL+qLe+qLeksl +iRs+K++++l+++++l++ke+ l e+n+a+++k++ RWR72852.1 84 ESQGTFDEYLSLKARVEFLQRSQRNLLGEDLEPLNTNELEQLEDQLEKSLHQIRSTKTQFMLDELSDLRRKERTLIEANRAIKRKWD 170 56667789***************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MGRGRVVLKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALIIFSN RGKLYEFCSS 60 SNMLKTLDRY QRCSQLEYGI LARESQGTFD EYLSLKARVE FLQRSQRNLL GEDLEPLNTN 120 ELEQLEDQLE KSLHQIRSTK TQFMLDELSD LRRKERTLIE ANRAIKRKWD YEFHSCQLEE 180 FETGNVLQLS WENSGQNIPC SRQPTHTETF FQPLERDPAP QIRYHPVSAE QTSIANPAQN 240 ATTFMPGWMV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 2e-95 | MIKC_MADS family protein |