PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72732.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C3H
Protein Properties Length: 300aa    MW: 31557.9 Da    PI: 9.7393
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.21.2e-07105130227
                 -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                 kt+ C+ +     Ck+Gd+C+FaHg+
  RWR72732.1 105 KTRMCNKYNSAEGCKFGDKCHFAHGE 130
                 899*******99************96 PP

2zf-CCCH37.34.5e-12267291126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 ykt+lC +fa+ G C +G+rC+FaHg
  RWR72732.1 267 YKTKLCENFAK-GSCTFGERCHFAHG 291
                 9**********.*************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDLARKRRPD AALNGNGGVA GSKRFKQELE SVPTGIGSKS KPCTKFFSTA GCPFGEGCHF  60
LHYVPGGINA VAHMTNHGNP ALPPSSRNHV VSPAIPDGTS PPFVKTRMCN KYNSAEGCKF  120
GDKCHFAHGE RELGKPIIPS HEDRPLASMT GRLAGRIEPP PPGLAAAASF GASATAKISV  180
DASLAGAIIG KAGVNSKQIC RVTGAKLSIR EHETDPNLRN IELEGTFDQI KQASTMVREL  240
IVNISSNASA PMKNNPAAAP SGPTSNYKTK LCENFAKGSC TFGERCHFAH GASEMRKPGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.12e-79C3H family protein