PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72712.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 431aa MW: 48364.9 Da PI: 6.8931

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.2	1.2e-30	257	311	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH++Fve veqLGG++kAtPk il+lm+ +gLt+ hvkSHLQkYR RWR72712.1 257 KTRIRWTQDLHDCFVESVEQLGGADKATPKGILNLMNHDGLTVLHVKSHLQKYRN 311 68****************************************************6 PP
2	Myb_DNA-binding	42.7	1.3e-13	261	310	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+++++ +v+ v+qlGg t+k I + m+ g+t ++ks++qky+ RWR72712.1 261 RWTQDLHDCFVESVEQLGGAdkaTPKGILNLMNhDGLTVLHVKSHLQKYR 310 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MNTNKIVSHE KKHDCLNNCC ASSILDGACQ NISSRQLLNR VICFPCASPE GIVHPNCPQK 60 LSSQSPNSVS YLERSSPQPD LMPTNPSFSP LSYSQSQSSA LYPSDHYPSF PPYVYQVNSL 120 SHFSPWSSTG FPSHRSSEAT SPVEFVKQND LNYQSHDSLQ SAVKLSSYGN QNSRISGHLS 180 RIQSRSFQGS ELLPFMESKM TGEDVILDGM RISSVEGIHN YSKLQNLQPA PEKQLPRHSS 240 GGVTSSNVSS GVAISNKTRI RWTQDLHDCF VESVEQLGGA DKATPKGILN LMNHDGLTVL 300 HVKSHLQKYR NAKYNLGSAE VRFERRTNVN DAQQIELETS RHITETLRLQ LEVQRCLHEQ 360 LENQQRLQMQ MEEHGKRLQK MLEKQQEKNS NLLESQDLDS LFPDEQPVIL DDAQFSNVGG 420 FENTHLPTKI S

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MNTNKIVSHE KKHDCLNNCC ASSILDGACQ NISSRQLLNR VICFPCASPE GIVHPNCPQK  60
LSSQSPNSVS YLERSSPQPD LMPTNPSFSP LSYSQSQSSA LYPSDHYPSF PPYVYQVNSL  120
SHFSPWSSTG FPSHRSSEAT SPVEFVKQND LNYQSHDSLQ SAVKLSSYGN QNSRISGHLS  180
RIQSRSFQGS ELLPFMESKM TGEDVILDGM RISSVEGIHN YSKLQNLQPA PEKQLPRHSS  240
GGVTSSNVSS GVAISNKTRI RWTQDLHDCF VESVEQLGGA DKATPKGILN LMNHDGLTVL  300
HVKSHLQKYR NAKYNLGSAE VRFERRTNVN DAQQIELETS RHITETLRLQ LEVQRCLHEQ  360
LENQQRLQMQ MEEHGKRLQK MLEKQQEKNS NLLESQDLDS LFPDEQPVIL DDAQFSNVGG  420
FENTHLPTKI S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	1e-49	G2-like family protein