PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72664.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 596aa MW: 68764 Da PI: 4.7461

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.6	3.6e-47	42	168	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppG+rFhP+d+el+ +yL +kv++ +le ++ikev++y+++P+dL k+k+ ekewyfF++r+kky++g+r+nra+ +gyWkatg dk+++s ++e+ RWR72664.1 42 LPPGYRFHPEDDELIRFYLLPKVRNIPLEY-NHIKEVNLYDYNPEDLTGKYKSCEKEWYFFTPRQKKYKNGSRPNRAAGNGYWKATGADKPIVSDDSET 139 79************************99.88***********9999999**************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 g++k Lvfy+g+ pkg k++W+mhe+r+ RWR72664.1 140 SGVRKALVFYEGKPPKGIKSNWIMHEFRI 168 *************************96 PP
2	NAM	147.5	6.9e-46	277	402	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppG+rFhP+d+el++ yL +k+++k+l+ ++ik+v++y+++P++L +k++ ++kew+fF++rd+ky++g+r+nra+ +gyWkatg dk++ s ++ + RWR72664.1 277 LPPGYRFHPNDDELICGYLLPKMQNKPLPW-NHIKDVNLYDYNPEELAAKYECSDKEWFFFTPRDRKYKNGSRPNRAAGRGYWKATGADKPINS-DSIT 373 79**************************.88**********999999************************************9.99 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg +k Lvfy g+ pkg+kt+W+m e+r+ RWR72664.1 374 VGFRKALVFYIGKPPKGKKTNWIMYEFRV 402 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MEGGDGCFDV SERRAQREED KAEGDRVIES STSSDDPPPL YLPPGYRFHP EDDELIRFYL 60 LPKVRNIPLE YNHIKEVNLY DYNPEDLTGK YKSCEKEWYF FTPRQKKYKN GSRPNRAAGN 120 GYWKATGADK PIVSDDSETS GVRKALVFYE GKPPKGIKSN WIMHEFRIIE GDPEMTSRKR 180 NASSMRLDDW VLCRIYENPE KGTKESQIPC PRDCENESPV KCQTEIGEQM ENLVEESSYG 240 NQFSIPEVSA EIFNFSGMPT TLSNDSSSSD DRRRLYLPPG YRFHPNDDEL ICGYLLPKMQ 300 NKPLPWNHIK DVNLYDYNPE ELAAKYECSD KEWFFFTPRD RKYKNGSRPN RAAGRGYWKA 360 TGADKPINSD SITVGFRKAL VFYIGKPPKG KKTNWIMYEF RVKEGVFEGI FPKRNRSSMR 420 LDDWVLCKIS EKLIKEKVSK ESPTDSPRDH EDESPATCLI DYTNESEILA SQRDYDNEQM 480 IKVLMEEPSY GNIMSTPEIK SEVFYSSVIP TTMPPVYPLT NLYNSNSCDP YDMLMMDFEP 540 LEPSYLAVPP PVYSNSTLDV SNVGVTNDQG EGEDEDMDQL EILKDYLDRF RHRGGM

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MEGGDGCFDV SERRAQREED KAEGDRVIES STSSDDPPPL YLPPGYRFHP EDDELIRFYL  60
LPKVRNIPLE YNHIKEVNLY DYNPEDLTGK YKSCEKEWYF FTPRQKKYKN GSRPNRAAGN  120
GYWKATGADK PIVSDDSETS GVRKALVFYE GKPPKGIKSN WIMHEFRIIE GDPEMTSRKR  180
NASSMRLDDW VLCRIYENPE KGTKESQIPC PRDCENESPV KCQTEIGEQM ENLVEESSYG  240
NQFSIPEVSA EIFNFSGMPT TLSNDSSSSD DRRRLYLPPG YRFHPNDDEL ICGYLLPKMQ  300
NKPLPWNHIK DVNLYDYNPE ELAAKYECSD KEWFFFTPRD RKYKNGSRPN RAAGRGYWKA  360
TGADKPINSD SITVGFRKAL VFYIGKPPKG KKTNWIMYEF RVKEGVFEGI FPKRNRSSMR  420
LDDWVLCKIS EKLIKEKVSK ESPTDSPRDH EDESPATCLI DYTNESEILA SQRDYDNEQM  480
IKVLMEEPSY GNIMSTPEIK SEVFYSSVIP TTMPPVYPLT NLYNSNSCDP YDMLMMDFEP  540
LEPSYLAVPP PVYSNSTLDV SNVGVTNDQG EGEDEDMDQL EILKDYLDRF RHRGGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	3e-56	NAC family protein