PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72461.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CPP

Protein Properties

Length: 605aa MW: 63911.3 Da PI: 7.8178

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.4	2.8e-13	135	174	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g++C+ C+C +C+N++e+ RWR72461.1 135 KQKQCNCKHSRCLKLYCECFASGVYCDG-CNCANCCNNSEN 174 89************************.******9985 PP
2	TCR	51	3e-16	219	258	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC +CkN+e RWR72461.1 219 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIECKNRE 258 589***********************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MEKEIQSVVP AESAPAPSVS SAQVLPAKKL APRQLDFTAF CSAAPMASVT AGQTMVAPTS 60 SIAAAQTMVP PMSSIAAGQT MVAPTASIAA GQTMVAPTAS VAAGQTMVAP PALRPLLPTA 120 VKTEPISRPG GTPKKQKQCN CKHSRCLKLY CECFASGVYC DGCNCANCCN NSENDAARKE 180 AIDLTLERNP HAFRPKIASS PHANRDRRDE AGDLPHAGKH NKGCHCKKSG CLKKYCECFQ 240 ANILCSENCK CIECKNREGS EERRALFHGE HGNSLAYIQQ AANAAITGAI GYASPPTLKK 300 RKNQELCFGT ATKDSPIHQL GQFPQANLKT TAPSSSLTSF PSTHVANPAV SGSSKLTYRS 360 LLADTVQPEN VKELCRRLAF VSREAAQKIA ERRGSTEEQG DKEDQMEGTY ASSCIDGNNS 420 QKEPGIQKAE VDSHLNANQT EKTATEESGS DGADVQKGRP MSPGTLALMC DEQDTSFMAS 480 ASPSGCAGHG QGTSLQLPFG KGVTEMYAEQ ERCVLTEFRD WLTKLINIGG MREALFSSLA 540 AKAEAVSHSE AVGNGAARAI AMVSTHTSAA VNVGATAASH NILPLKVGRP VENGELKLKI 600 ENAEI

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MEKEIQSVVP AESAPAPSVS SAQVLPAKKL APRQLDFTAF CSAAPMASVT AGQTMVAPTS  60
SIAAAQTMVP PMSSIAAGQT MVAPTASIAA GQTMVAPTAS VAAGQTMVAP PALRPLLPTA  120
VKTEPISRPG GTPKKQKQCN CKHSRCLKLY CECFASGVYC DGCNCANCCN NSENDAARKE  180
AIDLTLERNP HAFRPKIASS PHANRDRRDE AGDLPHAGKH NKGCHCKKSG CLKKYCECFQ  240
ANILCSENCK CIECKNREGS EERRALFHGE HGNSLAYIQQ AANAAITGAI GYASPPTLKK  300
RKNQELCFGT ATKDSPIHQL GQFPQANLKT TAPSSSLTSF PSTHVANPAV SGSSKLTYRS  360
LLADTVQPEN VKELCRRLAF VSREAAQKIA ERRGSTEEQG DKEDQMEGTY ASSCIDGNNS  420
QKEPGIQKAE VDSHLNANQT EKTATEESGS DGADVQKGRP MSPGTLALMC DEQDTSFMAS  480
ASPSGCAGHG QGTSLQLPFG KGVTEMYAEQ ERCVLTEFRD WLTKLINIGG MREALFSSLA  540
AKAEAVSHSE AVGNGAARAI AMVSTHTSAA VNVGATAASH NILPLKVGRP VENGELKLKI  600
ENAEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-150	CPP family protein