PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR72454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 1121aa MW: 123575 Da PI: 4.8456 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.3 | 4.3e-19 | 45 | 91 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEdell +av+q+ g++Wk+Ia+++ Rt+ qc +rwqk+l RWR72454.1 45 KGQWTAEEDELLCRAVQQYKGRNWKKIAECFK-DRTDVQCLHRWQKVL 91 799****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 56.6 | 6e-18 | 97 | 143 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+ ++d+v ++G + W+tIa+ ++ gR +kqc++rw+++l RWR72454.1 97 KGPWSKEEDDMIIDLVGKYGAKKWSTIAQALP-GRIGKQCRERWHNHL 143 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 49.5 | 9.9e-16 | 149 | 191 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ RWR72454.1 149 REAWTQEEELALIQAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 191 789*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1121 aa Download sequence |
MADKTKSARN SEVTAVVPSN GGSDCFQKPR PFHGRTSGPT RRSTKGQWTA EEDELLCRAV 60 QQYKGRNWKK IAECFKDRTD VQCLHRWQKV LNPELVKGPW SKEEDDMIID LVGKYGAKKW 120 STIAQALPGR IGKQCRERWH NHLNPSINRE AWTQEEELAL IQAHQIYGNK WAELTKFLPG 180 RTDNAIKNHW NSSVKKKVDS YLASGLLTQF QGLPNVENLN KYVSSSSANK PQESEDSGFK 240 DGVEVEELFN CSQGSTSVNC SNVTNAIPVH VQQEFEMREE DIREMMQVSD SSLGFKESCA 300 PIGETTCAVP EMPVQLSSHG FSNSSSFEKV RETSKWNSSG AGGNQEIGSI LVQDSIGLHA 360 PSSMENVLDH PIEPLDDILS FNGDGSKNKL LVTGIGKVQE SHCLVETSQW HSSDARGNHE 420 TESILVQDSI RFHSPRSMEN ILADPIEPLD DCNRNSFLET GIDKGFLLKS SAEGSNVVDL 480 DGCADSLIYQ CDVQGFEMAR AFASCSIVCQ SDNQGSEAVR MLASSSHPYC PCRPSDMSGM 540 SCSKSLFTSV SSSLPPGDSR DPFRSEDNEG QEISIETQNL EPVTCSYDEF VYTSVSKNPP 600 CTGDWANDGI YAESDQKKEV SELKTIEMFG FANRDAIGNH SRMEGSSNPH TEKWGSEYLS 660 YEPPRFPSLE IPFVNCDLIS SGDEAYSPLG IRRLMMSSMN CSTPYSLWDS SIDEENSDAA 720 LNGAAKSFIC TPSVLKKRNR DLLSPLQERK CDKKGLFCAS PLNRSDISCL DVIFDENGTC 780 KASLSSFEGA LISPSPYSRK RNSILVSPRD KENIDRKDEN GVEKIKQGLV GFEQLREAGV 840 DIGSQTKPTG VLVEHNMNDM LLFSPQDTFS TSGPLNTGAR TPRSLAGRSL ETTSDQIDLV 900 DGSVEPSSRD QGFFGVFTPN VGDKKHGHHL NPLALQVTVE KDGSFNSAGV ENINIFAETP 960 GTKRGIESPS SWKSPWFMNS LLSGQRFDTE ITFEDIGIFL SPGGRTYDAI GLMKQLNEHT 1020 AAALAEAKEV LATENPEMDV RHMNENCLAD QSSSKENNQL QDNEMGNPIL SQHNVLPFQT 1080 ERRVLDFNGC ATPIKENGKA NGGETSLNFS SPSSYLMKGC R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.1 | 1e-110 | MYB family protein |