PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR72415.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 237aa MW: 26568 Da PI: 5.6853 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 46.2 | 1.5e-14 | 13 | 86 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++y ++k + ++g r +r++ sg+Wk+ + +e++ +++++ k+tL++y ++ k ekt W mheyrl RWR72415.1 13 GKGDDLYIYMKIKP-LNNGWRVERKAGSGRWKNLKRGEEITL-GDRTIAYKTTLTYYVVKNGKEEKTCWSMHEYRL 86 34557788887755.569************************.999***********99***************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MLHLHTPGKF NKGKGDDLYI YMKIKPLNNG WRVERKAGSG RWKNLKRGEE ITLGDRTIAY 60 KTTLTYYVVK NGKEEKTCWS MHEYRLHRKN SEKQMGDELV LCKIYKRGGA GKTGEAIDEE 120 NNEETGGSIG SCSYLKSSTT VSNGFGQSFP DVHSLECFET EDLVTPTNGS CDLPMAAVND 180 PSQFVVSPIE DSVTPMNFYG DFPMPDVNNS FLFVGSPIED SLLVPMNAYG ISQYWLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 4e-14 | NAC family protein |