PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR72413.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 263aa MW: 30015.6 Da PI: 8.0765 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 90.4 | 3.2e-28 | 22 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrF+Ptd el+ yL+ k eg+++ +i+e+ k+ P +L++++++ +e+ wyfF+k++++ +g+r r + +g+Wk+ + +++ +++ RWR72413.1 22 LPPGFRFEPTDYELL-AYLRWKKEGHPIAN--IINEIPQDKCFPDELKREFSNrNEDGWYFFIKTKQH--SGNRVDRRAGNGTWKSGTGATGITH-GRK 114 79*************.9*****99999655..8**************9655551556******98775..688999999******8888899999.999 PP NAM 99 lvglkktLvf.ykgrapkgektdWvmheyrl 128 +vg k+tL+f y ++ +k++kt W mheyrl RWR72413.1 115 TVGYKTTLTFaYIQKGNKAKKTIWNMHEYRL 145 **********4477899999*********98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 263 aa Download sequence |
MGNESSSLWS PGIDLEYVKK NLPPGFRFEP TDYELLAYLR WKKEGHPIAN IINEIPQDKC 60 FPDELKREFS NRNEDGWYFF IKTKQHSGNR VDRRAGNGTW KSGTGATGIT HGRKTVGYKT 120 TLTFAYIQKG NKAKKTIWNM HEYRLPHQNG KRKGGDNLVL CKIYKRRVRG KTYDDALDEE 180 NTSISSIANN KTEVSNGSEH MLSDVSSTKS VEINHESSEL PNEVDKCLKW INGFLMGEEI 240 GDVPEEELNR LEGGIENDLR SIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G15500.1 | 6e-23 | NAC family protein |