PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72330.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 409aa MW: 44597.1 Da PI: 4.9396

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	46.2	1.5e-14	21	119	16	128
NAM 16 veyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrap 114 ++L+ + g + + +vi++v+ ++ Pw+L e+++yfF +rd ++ + r t+ gyW++ g + + + +++ + ++L fy+g+ap RWR72330.1 21 FDHLQSMMVGGPRPG-NVITDVNPSTCSPWELS------EEKLYFFDSRDATSVK---GIRFTNVGYWQENGCTLT----GPSNMAMITSLEFYTGQAP 105 479999999999888.89************5......6799*9997765...5677788*998433....566899********* PP NAM 115 kgektdWvmheyrl 128 +g +t W+m y++ RWR72330.1 106 HGDRTGWMMLVYTI 119 *******98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MRPPAALTPS IDNHEDNLEM FDHLQSMMVG GPRPGNVITD VNPSTCSPWE LSEEKLYFFD 60 SRDATSVKGI RFTNVGYWQE NGCTLTGPSN MAMITSLEFY TGQAPHGDRT GWMMLVYTID 120 RNSLGSSSLS RVFNRSDQSH SEEHPQAGSA DYSDGDLDRA LLMSLENEEI NHNLQESSSK 180 SQVLGRNERG LSAISGNDVQ NVRGDNLAQD LNAYDFSRGD YFEENDLNDL GASFSCSENS 240 SITSMSSDGI DQEEFLRILG TPAIPESYPE QYNSGLSLHD LETPAIPATN QRNSDCHHNV 300 SIPQGLHHIL IQPAPAGSIG TSRNGNPSTN VTVVSASVGS DHARAVPAAP VVEGRPVRRA 360 LNHGSAACEV NEVDQGPSTS RSAKVHGKRK AVSWRIAKIG KKYCCFFQF

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MRPPAALTPS IDNHEDNLEM FDHLQSMMVG GPRPGNVITD VNPSTCSPWE LSEEKLYFFD  60
SRDATSVKGI RFTNVGYWQE NGCTLTGPSN MAMITSLEFY TGQAPHGDRT GWMMLVYTID  120
RNSLGSSSLS RVFNRSDQSH SEEHPQAGSA DYSDGDLDRA LLMSLENEEI NHNLQESSSK  180
SQVLGRNERG LSAISGNDVQ NVRGDNLAQD LNAYDFSRGD YFEENDLNDL GASFSCSENS  240
SITSMSSDGI DQEEFLRILG TPAIPESYPE QYNSGLSLHD LETPAIPATN QRNSDCHHNV  300
SIPQGLHHIL IQPAPAGSIG TSRNGNPSTN VTVVSASVGS DHARAVPAAP VVEGRPVRRA  360
LNHGSAACEV NEVDQGPSTS RSAKVHGKRK AVSWRIAKIG KKYCCFFQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	4e-13	NAC family protein