PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR72111.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 402aa MW: 45324.1 Da PI: 4.8984

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR72111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	117.3	1.5e-36	14	134	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 p G+rF+Pt++el+ +yLk+k+++ +l++ + ikev++yk++P ++ + +e+++yfF+++ +ky++g+r++r+tksg Wka+ ++e+++ +++++ RWR72111.1 14 PCGYRFRPTEKELL-KYLKRKIDNLPLPC-DLIKEVELYKFDPTHFG---SRGEEKCYFFTSTYRKYRNGNRPSRSTKSGHWKASTGETEIKE-GNKVI 106 89**********.9*********.99**********6...347889************************99999.999 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+ ++Lvfy g++p +kt+W+mheyrl RWR72111.1 107 GTTRSLVFYYGEHPLEKKTNWIMHEYRL 134 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MSCGATTSTS MRVPCGYRFR PTEKELLKYL KRKIDNLPLP CDLIKEVELY KFDPTHFGSR 60 GEEKCYFFTS TYRKYRNGNR PSRSTKSGHW KASTGETEIK EGNKVIGTTR SLVFYYGEHP 120 LEKKTNWIMH EYRLSEHHSV NHAQFPTDPM KLDKWVICSI YENLSASERE NRKRKAIVLS 180 EGLDTTCKKR EIVLQQGPLN GYQENDLSMV PLFDNLPEER IPYDQSIVLY EGLNTKGKKR 240 EIILQQIPLN GNQENDQSIV PLNDHLLEEH IPIASDMGCN IAPLSDIDLA RELIPNASNT 300 GCDIAPLSDT DLAKELIANA SNTSCDINPL GDTDFAKLIE MLDREPANSF DNLPEELIPN 360 ASVMGCGIAP PSDTGIADFA ELMEILDRES TNYYDPSSSS SS

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MSCGATTSTS MRVPCGYRFR PTEKELLKYL KRKIDNLPLP CDLIKEVELY KFDPTHFGSR  60
GEEKCYFFTS TYRKYRNGNR PSRSTKSGHW KASTGETEIK EGNKVIGTTR SLVFYYGEHP  120
LEKKTNWIMH EYRLSEHHSV NHAQFPTDPM KLDKWVICSI YENLSASERE NRKRKAIVLS  180
EGLDTTCKKR EIVLQQGPLN GYQENDLSMV PLFDNLPEER IPYDQSIVLY EGLNTKGKKR  240
EIILQQIPLN GNQENDQSIV PLNDHLLEEH IPIASDMGCN IAPLSDIDLA RELIPNASNT  300
GCDIAPLSDT DLAKELIANA SNTSCDINPL GDTDFAKLIE MLDREPANSF DNLPEELIPN  360
ASVMGCGIAP PSDTGIADFA ELMEILDRES TNYYDPSSSS SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	9e-40	NAC family protein