PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023007775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 545aa MW: 60575.5 Da PI: 5.2603 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 427.9 | 8e-131 | 176 | 544 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 +e L +cA+a+ ++d+ ++l+++l+ ++s +g+p+qRl ay++eAL ar a+s++++ykal+++e +e l+++++++e++P++kf++l XP_023007775.1 176 KEMLCACARAIGENDMLTGEWLVSELRGMVSVSGEPIQRLGAYLLEALIARTASSGNSIYKALRCKEPI---GTEMLSYMHILYEICPYFKFGYL 267 789*****************************************************************9...9********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 aN aI ea++ge+rvHiiDf+i qG QW++L+qaLa+Rp+gpp++ iTg+++++s+ + le +g+rL+ +Ae+l vpfef+ +a + +++ XP_023007775.1 268 SANGAIAEAIKGENRVHIIDFQIAQGNQWITLMQALANRPGGPPKVTITGIDDSASTfaRGGGLEIVGKRLSLLAESLMVPFEFRG-IAGSASEI 361 *****************************************************99889999*************************.6999**** PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 ++e+L+v+pgEa+aV++ l lh+++desv ++++rd++L+lvkslsPkvv+vve e++ n+++F rfl++l+yy+a+f+s++++lpr+++eri+ XP_023007775.1 362 QPEDLKVQPGEAIAVSFTLVLHHMPDESVGSQNHRDRILRLVKSLSPKVVTVVELESNNNTAPFYSRFLQTLKYYTAIFESIDVTLPRDHKERIN 456 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 vE+++l+r+ivn+vacegaer+erhe l+kWr+r+ +aGFkp pls ++++++++ll+++++ y++ee++g+l+lgW +++Lv+ SaW XP_023007775.1 457 VEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFKPHPLSPFVNATIEALLKNYSD-KYTLEERDGALYLGWLNQNLVTSSAW 544 *************************************************************5.5************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 545 aa Download sequence |
MQESSRKKVP NQSHRFYEQP PQEPGSCYWP PMNHEGGLYS DDVFEQNHLP SEAFKQYCNL 60 ESSSGTSGYP PQNSSSTASF TSNGSPSSHQ ECHSYPLDPY YSPDNNCGSP VSRSCLTDDA 120 ADDLRHKIRE LETAMLGPDA DGFDIYLVAN PVDPVLPVQE AGWKDVAEIM TRKDLKEMLC 180 ACARAIGEND MLTGEWLVSE LRGMVSVSGE PIQRLGAYLL EALIARTASS GNSIYKALRC 240 KEPIGTEMLS YMHILYEICP YFKFGYLSAN GAIAEAIKGE NRVHIIDFQI AQGNQWITLM 300 QALANRPGGP PKVTITGIDD SASTFARGGG LEIVGKRLSL LAESLMVPFE FRGIAGSASE 360 IQPEDLKVQP GEAIAVSFTL VLHHMPDESV GSQNHRDRIL RLVKSLSPKV VTVVELESNN 420 NTAPFYSRFL QTLKYYTAIF ESIDVTLPRD HKERINVEQH CLARDIVNIV ACEGAERVER 480 HELLGKWRSR FLMAGFKPHP LSPFVNATIE ALLKNYSDKY TLEERDGALY LGWLNQNLVT 540 SSAWI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |