PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007242.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 222aa MW: 25128.2 Da PI: 10.5368

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	4e-16	31	76	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+q+G+ +W+ Ia+++ R++k+c++rw++ XP_023007242.1 31 RGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFE-ARSGKSCRLRWYNQ 76 899***************************.**********96 PP
2	Myb_DNA-binding	50.8	3.7e-16	83	126	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ +++G++ W++Iar++ gRt++ +k++++ XP_023007242.1 83 KNPFTEEEEERLLIFQQLHGNK-WALIARHLK-GRTDNAVKNHYHV 126 689*****************.****9.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MIRSRSSSSS SGGGGGSGGC GSGSSGVTCY RGHWRPAEDN KLRQLVEQFG PQNWNYIAEH 60 FEARSGKSCR LRWYNQLDPN INKNPFTEEE EERLLIFQQL HGNKWALIAR HLKGRTDNAV 120 KNHYHVIMAR RRRERFTIFT NNNNNILRSR HCLLPFSNVL QSSHQKITPK WSPLTVGPTL 180 ENGRGKSAAV VASSGSDERE EEMKGEQKRR IPFIDFLGMG SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33450.1	2e-54	MYB family protein