PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023007203.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 357aa MW: 40863.6 Da PI: 4.7758 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.7 | 7.7e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yL +k++g+++el e+i+e+d+yk+ePw+Lp k + +++ ewyf+s+rd+ky++g+r+nrat+ gyWkatgkd++v XP_023007203.1 6 LPPGFRFHPTDEELVAYYLDRKINGRSIEL-EIIPEIDLYKCEPWELPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRTVQ 99 79****************************.99**************96435566888************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+ykgrap+g +t+Wvmheyrl XP_023007203.1 100 S-QKRAVGMKKTLVYYKGRAPHGIRTNWVMHEYRL 133 9.9999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MAPMTLPPGF RFHPTDEELV AYYLDRKING RSIELEIIPE IDLYKCEPWE LPDKSFLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRGGYWK ATGKDRTVQS QKRAVGMKKT LVYYKGRAPH 120 GIRTNWVMHE YRLLDSQLAN ATSSPSTKDS YALCRVFKKT TQVPKSIGEK EIEGNAEAPT 180 WQTADEHDMQ VDDSGGPESS RGGMESNEDV DSFGHFLHEY NPKIFSSENS SSDLTQGNVA 240 DDLPAPVASD NEANSAANNL YPIYIDCPSN FMQIPNKFMD HENLHYQHPY YPPLELEDFP 300 QLNIMGETKT LMKPECIDEY MKFDKFRDSM NGTLEEILSL CSLPMQEDNV QNSSLLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54330.1 | 1e-104 | NAC family protein |