PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007150.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 542aa MW: 61720.1 Da PI: 8.4488

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.8	1.6e-10	491	539	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l av+++G+g+Wk+I + Rt+ ++k++w++ XP_023007150.1 491 KRWSLLEEDTLRTAVQRFGKGNWKLILNSYReifDERTEVDLKDKWRNM 539 69******************************99*********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MNDQLLKRTL AIMPFPDNDF RLKKTVLLRA IESERSEAIV TEKVLAIFEM IEQLDKTEGL 60 AMMDSMKSAY CAVAVECTVK YLAVEGMKNN GKYFDTVSRI WRGRVMELKR SGRSELVSRE 120 LEEWKDKVEA ALWDKTVWKK LVNMNSRYEA LKLIGDYLGE AWGVLGPSFL ELSASLMDNR 180 TRNEMQSVQL EQAIHKTAVV SEDVGGSGGI ELPSQTENHA KREHQGSVPV LTRAETKRND 240 VLDINQDSGV NDNSKRSSTV EMNTERVQEL PTETTEGKES VEKEVTVLQD PSPNCRKNLK 300 TSVLPRCKSL ASHKRVRGGA KIGHLEDLEN DSSSGKSTCL QTPEFDRVRE AFKTSSLELQ 360 ALVKDPLPDA LRIAESVAQD LAKKNKTPEH SLEDQNDAVA ANPAINKDNM PLQSMNTAFN 420 NPRHGHQTIV PRPSIMERNS SACTYEWNDS IDGSPERNRA SRLHLPSPKR KVISPLKKYE 480 ETRLVWRRKC KRWSLLEEDT LRTAVQRFGK GNWKLILNSY REIFDERTEV DLKDKWRNMT 540 RY

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MNDQLLKRTL AIMPFPDNDF RLKKTVLLRA IESERSEAIV TEKVLAIFEM IEQLDKTEGL  60
AMMDSMKSAY CAVAVECTVK YLAVEGMKNN GKYFDTVSRI WRGRVMELKR SGRSELVSRE  120
LEEWKDKVEA ALWDKTVWKK LVNMNSRYEA LKLIGDYLGE AWGVLGPSFL ELSASLMDNR  180
TRNEMQSVQL EQAIHKTAVV SEDVGGSGGI ELPSQTENHA KREHQGSVPV LTRAETKRND  240
VLDINQDSGV NDNSKRSSTV EMNTERVQEL PTETTEGKES VEKEVTVLQD PSPNCRKNLK  300
TSVLPRCKSL ASHKRVRGGA KIGHLEDLEN DSSSGKSTCL QTPEFDRVRE AFKTSSLELQ  360
ALVKDPLPDA LRIAESVAQD LAKKNKTPEH SLEDQNDAVA ANPAINKDNM PLQSMNTAFN  420
NPRHGHQTIV PRPSIMERNS SACTYEWNDS IDGSPERNRA SRLHLPSPKR KVISPLKKYE  480
ETRLVWRRKC KRWSLLEEDT LRTAVQRFGK GNWKLILNSY REIFDERTEV DLKDKWRNMT  540
RY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	4e-19	MYB_related family protein