PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007111.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 427aa MW: 47563.4 Da PI: 5.8871

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.7	2.6e-17	140	189	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_023007111.1 140 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 189 78*****************......55**********************998 PP
2	AP2	41	4.9e-13	232	282	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_023007111.1 232 SKFRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDSEIEAARAYDKAAIKCNG 282 79******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MWDLNDSPDH GGTDEFEGLS SIDGDDERAK WVGSINSNSS SSAVILEDGS DADEASVGER 60 EHPISRESFS ATHPPETRQF FPLENSNVDA SSTGGGSTAF PRARWFGVKF CQTEPVSAVR 120 PMVVLQPIKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHSAARAY 180 DRAAIKFRGT DADINFSIED YEEDLKQMGK LTKEEFVHVL RRQSTGYPRG SSKFRGVTLH 240 KCGRWEARMG QFLGKKYVYL GLFDSEIEAA RAYDKAAIKC NGKEAVTNFD PTIYENELTT 300 DTSSGNVLEQ NLDLRLGNSS SKQHTNDMQN KESNVLEKMQ FGSETIIRCP PSIDTTIHGQ 360 SPYINESNSE IDVSLSLSER QQWQQGCGGY EQIGTASAAS SGFPQIQVSS SPNWVKKNNG 420 CFLERPF

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MWDLNDSPDH GGTDEFEGLS SIDGDDERAK WVGSINSNSS SSAVILEDGS DADEASVGER  60
EHPISRESFS ATHPPETRQF FPLENSNVDA SSTGGGSTAF PRARWFGVKF CQTEPVSAVR  120
PMVVLQPIKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHSAARAY  180
DRAAIKFRGT DADINFSIED YEEDLKQMGK LTKEEFVHVL RRQSTGYPRG SSKFRGVTLH  240
KCGRWEARMG QFLGKKYVYL GLFDSEIEAA RAYDKAAIKC NGKEAVTNFD PTIYENELTT  300
DTSSGNVLEQ NLDLRLGNSS SKQHTNDMQN KESNVLEKMQ FGSETIIRCP PSIDTTIHGQ  360
SPYINESNSE IDVSLSLSER QQWQQGCGGY EQIGTASAAS SGFPQIQVSS SPNWVKKNNG  420
CFLERPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-123	AP2 family protein