PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007104.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 268aa MW: 29493.2 Da PI: 7.8921

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.8	6.7e-20	9	54	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G+++W++I++ ++ gR++k+c++rw + XP_023007104.1 9 KGPWSPEEDEALQRLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 54 79****************************.*********985 PP
2	Myb_DNA-binding	52.9	8.6e-17	63	105	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a +++G++ W++Iar + gRt++ +k++w++ XP_023007104.1 63 PFTQEEDETIINAQALYGNK-WAAIARLLS-GRTDNAIKNHWNST 105 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MAKQLDRIKG PWSPEEDEAL QRLVQKHGPR NWSLISKSIP GRSGKSCRLR WCNQLSPQVE 60 HRPFTQEEDE TIINAQALYG NKWAAIARLL SGRTDNAIKN HWNSTLKRKC SSMADESGGC 120 YTSSPPLKRS VSAGHSPSGS DVSDSGFFPA VSSPHVYRPV ARTRGVVPPV ETVSSSNDEP 180 ETLLSLSLPG AESSERGIWM LPATGEKEER SSNRLGYFSP ELMAVMQEMI RKEVRNYMDG 240 LMEQNVSGGV CFQEAAAGGF RNVVGLID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	2e-87	MYB family protein