PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007024.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 246aa MW: 28076.2 Da PI: 8.0455

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.3e-17	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +l++ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_023007024.1 9 KGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 56 79********************************************97 PP
2	Myb_DNA-binding	54.6	2.4e-17	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++t+E+ l +++++++G++ W++Iar+++ gRt++++k++w++++ XP_023007024.1 62 RGKMSTQEERLVLELHAKWGNR-WSKIARKLP-GRTDNEIKNYWRTHM 107 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MEEGQGIRKG PWTEQEDIQL ICFVGLFGDR RWDFIAKVSG LNRTGKSCRL RWVNYLHPGL 60 KRGKMSTQEE RLVLELHAKW GNRWSKIARK LPGRTDNEIK NYWRTHMRKK AQEKRRALCS 120 SSSSSSSSSC SSSSGPVKFF DSGGSEISAS SSTKKKGEEN QGVGDPNGYS MDDIWKDIDM 180 CDDHEGLIIN QDSNYSCPAL NPPSWEYYCG DSSWKMEEEE SKLIFSGYDD HNGRPRLAQA 240 NQNFFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46130.1	1e-74	MYB family protein