PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006686.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 832aa    MW: 89500.7 Da    PI: 5.9164
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox651e-20131186156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe++F+++++p++++r eL+++l L++rqVk+WFqNrR+++k
  XP_023006686.1 131 KKRYHRHTPQQIQELEAVFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 186
                     688999***********************************************999 PP

2START211.72.8e-663395651206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+ +ep+W        e++n++e++++f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t+
  XP_023006686.1 339 ELALAAMDELVKMAQTDEPLWIGNLeggrEILNQEEYMRTFTPCIGmksngFVTEASRETGMVIINSLALVETLMDSN-RWAEMFPcmiaRTTTI 432
                     5899******************9999****************9888999999**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--...-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe..sssvvRaellpSgiliepksnghskvtwve 168
                     +vissg      galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvSvd  ++ p+   s+++ +++lpSg+++++++ng+skvtwve
  XP_023006686.1 433 DVISSGmggsrnGALQLMHAELQVLSPLVPvREVSFLRFCKQHAEGVWAVVDVSVDAMRETPTggGSPFINCRRLPSGCVVQDMPNGYSKVTWVE 527
                     *************************************************************999******************************* PP

                     -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     h++++++++h+l+r+l++sg+ +ga++wvatlqrqce+
  XP_023006686.1 528 HAEYDDSQVHQLYRPLLSSGMGFGAQRWVATLQRQCEC 565
                     ************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 832 aa     Download sequence    
MSFGGFLDGG GGGGAGARFV ADLPYTINST TNNNPTGGIG GGGNISSGAI APPRLITQSL  60
TKSMFNSPGL SLALTNMDGG QGDLAARLPE GFEHNVGRRG REEEHESRSG SDNMDGGSGD  120
DQDAADNPPR KKRYHRHTPQ QIQELEAVFK ECPHPDEKQR LELSRRLCLE TRQVKFWFQN  180
RRTQMKTQLE RHENTLLRQE NDKLRAENMS IRDAMRNPIC SNCGGPAIIG EISLEEQQLR  240
IDNARLKDEL DRVCALAGKF LGRPILSLAN SIAPPLPSSS LELGVGSNGF GNLTMATSMP  300
IGPDFGGGLS GNLAVVQPPV RPTPGTGLDR SVERSMLLEL ALAAMDELVK MAQTDEPLWI  360
GNLEGGREIL NQEEYMRTFT PCIGMKSNGF VTEASRETGM VIINSLALVE TLMDSNRWAE  420
MFPCMIARTT TIDVISSGMG GSRNGALQLM HAELQVLSPL VPVREVSFLR FCKQHAEGVW  480
AVVDVSVDAM RETPTGGGSP FINCRRLPSG CVVQDMPNGY SKVTWVEHAE YDDSQVHQLY  540
RPLLSSGMGF GAQRWVATLQ RQCECLAILM SSAAPIRDHT AITAGGRRSM LKLAQRMTAN  600
FCAGVCASTV HKWNKLNAGS VDEDVRVMTR KSVDDPGEPP GIVLSAATSV WLPVSPQRLF  660
DFLRDERLRS EWDILSNGGP MQEMAHIAKG QDHGNCVSLL RASAMNANQS SMLILQETCI  720
DAAGSLVVYA PVDIPAMHVV MNGGDSAYVA LLPSGFAIVA DGAVTGGRSP SGGEGGRQGE  780
RGTGGGSLLT VAFQILVNSL PTAKLTVESV ETVNNLISCT VQKIKAALQC ET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein