PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023006686.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 832aa MW: 89500.7 Da PI: 5.9164 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65 | 1e-20 | 131 | 186 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p++++r eL+++l L++rqVk+WFqNrR+++k XP_023006686.1 131 KKRYHRHTPQQIQELEAVFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 186 688999***********************************************999 PP | |||||||
2 | START | 211.7 | 2.8e-66 | 339 | 565 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 ela++a++elvk+a+ +ep+W e++n++e++++f++ + + +ea+r++g+v+ ++ lve+l+d++ +W e+++ + +t+ XP_023006686.1 339 ELALAAMDELVKMAQTDEPLWIGNLeggrEILNQEEYMRTFTPCIGmksngFVTEASRETGMVIINSLALVETLMDSN-RWAEMFPcmiaRTTTI 432 5899******************9999****************9888999999**************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--...-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe..sssvvRaellpSgiliepksnghskvtwve 168 +vissg galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvSvd ++ p+ s+++ +++lpSg+++++++ng+skvtwve XP_023006686.1 433 DVISSGmggsrnGALQLMHAELQVLSPLVPvREVSFLRFCKQHAEGVWAVVDVSVDAMRETPTggGSPFINCRRLPSGCVVQDMPNGYSKVTWVE 527 *************************************************************999******************************* PP -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206 h++++++++h+l+r+l++sg+ +ga++wvatlqrqce+ XP_023006686.1 528 HAEYDDSQVHQLYRPLLSSGMGFGAQRWVATLQRQCEC 565 ************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 832 aa Download sequence |
MSFGGFLDGG GGGGAGARFV ADLPYTINST TNNNPTGGIG GGGNISSGAI APPRLITQSL 60 TKSMFNSPGL SLALTNMDGG QGDLAARLPE GFEHNVGRRG REEEHESRSG SDNMDGGSGD 120 DQDAADNPPR KKRYHRHTPQ QIQELEAVFK ECPHPDEKQR LELSRRLCLE TRQVKFWFQN 180 RRTQMKTQLE RHENTLLRQE NDKLRAENMS IRDAMRNPIC SNCGGPAIIG EISLEEQQLR 240 IDNARLKDEL DRVCALAGKF LGRPILSLAN SIAPPLPSSS LELGVGSNGF GNLTMATSMP 300 IGPDFGGGLS GNLAVVQPPV RPTPGTGLDR SVERSMLLEL ALAAMDELVK MAQTDEPLWI 360 GNLEGGREIL NQEEYMRTFT PCIGMKSNGF VTEASRETGM VIINSLALVE TLMDSNRWAE 420 MFPCMIARTT TIDVISSGMG GSRNGALQLM HAELQVLSPL VPVREVSFLR FCKQHAEGVW 480 AVVDVSVDAM RETPTGGGSP FINCRRLPSG CVVQDMPNGY SKVTWVEHAE YDDSQVHQLY 540 RPLLSSGMGF GAQRWVATLQ RQCECLAILM SSAAPIRDHT AITAGGRRSM LKLAQRMTAN 600 FCAGVCASTV HKWNKLNAGS VDEDVRVMTR KSVDDPGEPP GIVLSAATSV WLPVSPQRLF 660 DFLRDERLRS EWDILSNGGP MQEMAHIAKG QDHGNCVSLL RASAMNANQS SMLILQETCI 720 DAAGSLVVYA PVDIPAMHVV MNGGDSAYVA LLPSGFAIVA DGAVTGGRSP SGGEGGRQGE 780 RGTGGGSLLT VAFQILVNSL PTAKLTVESV ETVNNLISCT VQKIKAALQC ET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |