PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006401.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 913aa MW: 103122 Da PI: 7.9573

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.7	7.6e-52	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl+++ei aiL n++ + ++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ve +++yYah+ +nptf rr XP_023006401.1 35 EaSARWLRPNEIQAILCNYKYFVIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRR 129 4589***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e+k XP_023006401.1 130 CYWLLDKSLEHIVLVHYRETK 150 ****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 913 aa Download sequence
MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIQAIL CNYKYFVIHV 60 KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG 120 LDNPTFVRRC YWLLDKSLEH IVLVHYRETK ESSPSTSMNS NSGSVSNPSA HWLLSEELDS 180 RATHVYSVGG NELSEPSDTT TVMAHEQRLH EINTLEWDEL LVTNEPLKPA MTKEDKLSCF 240 DQQNQVPINV ANKIFGVITS FNNPVESIGS ANSIGSVNMS LMGGQTNLNV ESRESIPINS 300 LDNLLNDGGL QSQDSLGQWI NEVITDSPGS VIDPAIEPSI SSVHNSYCDS TLYHHHSSVE 360 QIFNITAVSP AWAFSTEKTK IVIIGYFSDE YVHLAKSKIS VVCGDTSINA DFVQPGVYSC 420 QVEPRSPGLV HLYLSLVGHK PISQVLNFEY RAPLLQVPEV TSEQILEWEE FQVQMRLAHL 480 MFSTSKSLSI MSTKLSPTAL NDAKKLAVKT SGISDGWIYL LKSVTENKTP IPQAREGVLE 540 MILRSRLREW LIERVAEGSK KSTEFDVNGQ GVIHLCAMLG YTWAVHLFVW SGLSINFRDK 600 SGWTALHWAA YYGRERMVAA LLSVGAKPSL ITDPTSKNPL GYTAADLASI NGFNGLAAYL 660 SEKALVSHFE EMSLAGNVSG SLETNTIPDT TNFDSVSEEQ MYMKETLAAY RTAADAAARI 720 QAAFREHSLK QRTDAIELST PEAEARGIVA AMKIQHAFRN FETRKKMAAA ARIQYRFRTW 780 KIRKDFLNMR RQIIRIQAAF RGFQVRRQYR KIVWSVGIVE KAILRWRLKR KGFRGLQVAP 840 AEVTEYQETG MEEDFYRVSQ KQAEERVERA VIRVQAMFRS KKVQEEYRRM KLTHAEAALE 900 YEELSHPDMK LNG

Sequence ? help Back to Top

Protein Sequence Length: 913 aa Download sequence

MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIQAIL CNYKYFVIHV  60
KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG  120
LDNPTFVRRC YWLLDKSLEH IVLVHYRETK ESSPSTSMNS NSGSVSNPSA HWLLSEELDS  180
RATHVYSVGG NELSEPSDTT TVMAHEQRLH EINTLEWDEL LVTNEPLKPA MTKEDKLSCF  240
DQQNQVPINV ANKIFGVITS FNNPVESIGS ANSIGSVNMS LMGGQTNLNV ESRESIPINS  300
LDNLLNDGGL QSQDSLGQWI NEVITDSPGS VIDPAIEPSI SSVHNSYCDS TLYHHHSSVE  360
QIFNITAVSP AWAFSTEKTK IVIIGYFSDE YVHLAKSKIS VVCGDTSINA DFVQPGVYSC  420
QVEPRSPGLV HLYLSLVGHK PISQVLNFEY RAPLLQVPEV TSEQILEWEE FQVQMRLAHL  480
MFSTSKSLSI MSTKLSPTAL NDAKKLAVKT SGISDGWIYL LKSVTENKTP IPQAREGVLE  540
MILRSRLREW LIERVAEGSK KSTEFDVNGQ GVIHLCAMLG YTWAVHLFVW SGLSINFRDK  600
SGWTALHWAA YYGRERMVAA LLSVGAKPSL ITDPTSKNPL GYTAADLASI NGFNGLAAYL  660
SEKALVSHFE EMSLAGNVSG SLETNTIPDT TNFDSVSEEQ MYMKETLAAY RTAADAAARI  720
QAAFREHSLK QRTDAIELST PEAEARGIVA AMKIQHAFRN FETRKKMAAA ARIQYRFRTW  780
KIRKDFLNMR RQIIRIQAAF RGFQVRRQYR KIVWSVGIVE KAILRWRLKR KGFRGLQVAP  840
AEVTEYQETG MEEDFYRVSQ KQAEERVERA VIRVQAMFRS KKVQEEYRRM KLTHAEAALE  900
YEELSHPDMK LNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein