PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006400.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 915aa MW: 103437 Da PI: 7.9573

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.7	7.6e-52	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl+++ei aiL n++ + ++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ve +++yYah+ +nptf rr XP_023006400.1 35 EaSARWLRPNEIQAILCNYKYFVIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRR 129 4589***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e+k XP_023006400.1 130 CYWLLDKSLEHIVLVHYRETK 150 ****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIQAIL CNYKYFVIHV 60 KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG 120 LDNPTFVRRC YWLLDKSLEH IVLVHYRETK EWQSSPSTSM NSNSGSVSNP SAHWLLSEEL 180 DSRATHVYSV GGNELSEPSD TTTVMAHEQR LHEINTLEWD ELLVTNEPLK PAMTKEDKLS 240 CFDQQNQVPI NVANKIFGVI TSFNNPVESI GSANSIGSVN MSLMGGQTNL NVESRESIPI 300 NSLDNLLNDG GLQSQDSLGQ WINEVITDSP GSVIDPAIEP SISSVHNSYC DSTLYHHHSS 360 VEQIFNITAV SPAWAFSTEK TKIVIIGYFS DEYVHLAKSK ISVVCGDTSI NADFVQPGVY 420 SCQVEPRSPG LVHLYLSLVG HKPISQVLNF EYRAPLLQVP EVTSEQILEW EEFQVQMRLA 480 HLMFSTSKSL SIMSTKLSPT ALNDAKKLAV KTSGISDGWI YLLKSVTENK TPIPQAREGV 540 LEMILRSRLR EWLIERVAEG SKKSTEFDVN GQGVIHLCAM LGYTWAVHLF VWSGLSINFR 600 DKSGWTALHW AAYYGRERMV AALLSVGAKP SLITDPTSKN PLGYTAADLA SINGFNGLAA 660 YLSEKALVSH FEEMSLAGNV SGSLETNTIP DTTNFDSVSE EQMYMKETLA AYRTAADAAA 720 RIQAAFREHS LKQRTDAIEL STPEAEARGI VAAMKIQHAF RNFETRKKMA AAARIQYRFR 780 TWKIRKDFLN MRRQIIRIQA AFRGFQVRRQ YRKIVWSVGI VEKAILRWRL KRKGFRGLQV 840 APAEVTEYQE TGMEEDFYRV SQKQAEERVE RAVIRVQAMF RSKKVQEEYR RMKLTHAEAA 900 LEYEELSHPD MKLNG

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIQAIL CNYKYFVIHV  60
KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG  120
LDNPTFVRRC YWLLDKSLEH IVLVHYRETK EWQSSPSTSM NSNSGSVSNP SAHWLLSEEL  180
DSRATHVYSV GGNELSEPSD TTTVMAHEQR LHEINTLEWD ELLVTNEPLK PAMTKEDKLS  240
CFDQQNQVPI NVANKIFGVI TSFNNPVESI GSANSIGSVN MSLMGGQTNL NVESRESIPI  300
NSLDNLLNDG GLQSQDSLGQ WINEVITDSP GSVIDPAIEP SISSVHNSYC DSTLYHHHSS  360
VEQIFNITAV SPAWAFSTEK TKIVIIGYFS DEYVHLAKSK ISVVCGDTSI NADFVQPGVY  420
SCQVEPRSPG LVHLYLSLVG HKPISQVLNF EYRAPLLQVP EVTSEQILEW EEFQVQMRLA  480
HLMFSTSKSL SIMSTKLSPT ALNDAKKLAV KTSGISDGWI YLLKSVTENK TPIPQAREGV  540
LEMILRSRLR EWLIERVAEG SKKSTEFDVN GQGVIHLCAM LGYTWAVHLF VWSGLSINFR  600
DKSGWTALHW AAYYGRERMV AALLSVGAKP SLITDPTSKN PLGYTAADLA SINGFNGLAA  660
YLSEKALVSH FEEMSLAGNV SGSLETNTIP DTTNFDSVSE EQMYMKETLA AYRTAADAAA  720
RIQAAFREHS LKQRTDAIEL STPEAEARGI VAAMKIQHAF RNFETRKKMA AAARIQYRFR  780
TWKIRKDFLN MRRQIIRIQA AFRGFQVRRQ YRKIVWSVGI VEKAILRWRL KRKGFRGLQV  840
APAEVTEYQE TGMEEDFYRV SQKQAEERVE RAVIRVQAMF RSKKVQEEYR RMKLTHAEAA  900
LEYEELSHPD MKLNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein