PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023006202.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 473aa MW: 53071.1 Da PI: 7.455 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.9e-15 | 22 | 66 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT++Ed++l + ++q+G+++W+ Ia+++ +t qc+ rw++yl XP_023006202.1 22 SWTQQEDDILREQINQHGTENWAIIASKFK-DKTTRQCRRRWYTYL 66 6****************************9.*************97 PP | |||||||
2 | Myb_DNA-binding | 45.2 | 2.2e-14 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_023006202.1 72 KGGWSPEEDLLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 115 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence |
MQDTKKKLAT EDCKKKERHI VSWTQQEDDI LREQINQHGT ENWAIIASKF KDKTTRQCRR 60 RWYTYLNSDF KKGGWSPEED LLLCEAQKIF GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR 120 AKYEALAKEN SSSFINHNNK RVLFQKGSND VSSETSQSGK RIRRAHISHT TESCSLDDGL 180 KKPCSARDQQ LRAPFAALVE NVPSIDNLPG ELPMNNAEGL KTTQGNKNQE TFIKKDDPKV 240 TALTQQAELL SSLALKVNSE NTDQSLENAW KILQNFLSRT KGNDIPRYVT PDIDLQVEDT 300 KGSVEDLRSS NDGSQWRESN LHESPGSSEY STGSTLVSQT AEEKIDQSQP EIGTHHQEPK 360 FESGSTCTGE QNNGESEKEI LPKTNLERAE AFKCCNERKI DTIASSFSSS EFSSPMHVIP 420 LFRSLAAGIP SPQFSESERS FLLKTLGVES PSLNPSVNPS QPPPCKRALL QSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14350.1 | 1e-167 | MYB family protein |