PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005804.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 757aa MW: 83832.3 Da PI: 4.5956

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13	0.00019	550	587	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ a K s + L ++++Y+ Lq XP_023005804.1 550 RQQIQDRIKELRGIIPSgA------KCSIDSLLDRTIKYMLFLQ 587 89*************77......7777779******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MGETELGLVL NRICSGNRWS YGVFWSFDRR NSMLLTLEDF WYEEQVGLVA TNMLQQVHML 60 GEGVIGTAAF TGKHRWVFSD AYVGVWSSAM FQDNLEFEQQ FFCGIKTIAV IPVQPYGVLQ 120 LGSTHKILES LEFLADAKKS LCRVHEEPTP LASNTDIRHV NELFTSIVSS TNSDDWSLSA 180 MHTNFSGKSY ASTDKQPVYD TSCFSKSSEN SVLTSPEPLP TSDVREQDAQ YPSYSDANML 240 ESCRNETEYG NNSTTFTPVS SGIGSLPIDI VQPSSQLLPM NEGELIDSIT SLPDFCDERL 300 TEDSFVDDLF QWFDSSPEIG TDGVTTALNH SLPTGVSTLS SNLVEARKFE DDPSKTSVVS 360 AQSLITNGQD MQDTKDRLFD SLGLATGCPV VKTWDNIITE AHGSYSGGCN SMSTCTSKLA 420 TGSSDLPRKR LFWELGIEEL LDGLSNTSSA TKSSIENHQT IASKRSKMER SSLDRCIDVN 480 LTQPLCMVDS FPSTNEAVPK SRVSSWIDDS YSINIGGSIL EPSHKSEEPA KTFKKRARPG 540 ESNRPRPKDR QQIQDRIKEL RGIIPSGAKC SIDSLLDRTI KYMLFLQSVT KYADKLKETN 600 EPKLIDQENG VGVSDKYTTE RGGGGVTWAF KLGSMPMVCP VIVEDLSSPG QMLIEMLCEE 660 RGLFLEIAEM IRSYGLTILK GVMEVREEKI WAQFVVEVKL NANRSVTRIN VFVSLMELLQ 720 QANIGGAEIA NESSNVPIMD SFDKAITQSG YAYMKSR

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MGETELGLVL NRICSGNRWS YGVFWSFDRR NSMLLTLEDF WYEEQVGLVA TNMLQQVHML  60
GEGVIGTAAF TGKHRWVFSD AYVGVWSSAM FQDNLEFEQQ FFCGIKTIAV IPVQPYGVLQ  120
LGSTHKILES LEFLADAKKS LCRVHEEPTP LASNTDIRHV NELFTSIVSS TNSDDWSLSA  180
MHTNFSGKSY ASTDKQPVYD TSCFSKSSEN SVLTSPEPLP TSDVREQDAQ YPSYSDANML  240
ESCRNETEYG NNSTTFTPVS SGIGSLPIDI VQPSSQLLPM NEGELIDSIT SLPDFCDERL  300
TEDSFVDDLF QWFDSSPEIG TDGVTTALNH SLPTGVSTLS SNLVEARKFE DDPSKTSVVS  360
AQSLITNGQD MQDTKDRLFD SLGLATGCPV VKTWDNIITE AHGSYSGGCN SMSTCTSKLA  420
TGSSDLPRKR LFWELGIEEL LDGLSNTSSA TKSSIENHQT IASKRSKMER SSLDRCIDVN  480
LTQPLCMVDS FPSTNEAVPK SRVSSWIDDS YSINIGGSIL EPSHKSEEPA KTFKKRARPG  540
ESNRPRPKDR QQIQDRIKEL RGIIPSGAKC SIDSLLDRTI KYMLFLQSVT KYADKLKETN  600
EPKLIDQENG VGVSDKYTTE RGGGGVTWAF KLGSMPMVCP VIVEDLSSPG QMLIEMLCEE  660
RGLFLEIAEM IRSYGLTILK GVMEVREEKI WAQFVVEVKL NANRSVTRIN VFVSLMELLQ  720
QANIGGAEIA NESSNVPIMD SFDKAITQSG YAYMKSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-49	bHLH family protein