PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005708.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 769aa MW: 85776.2 Da PI: 6.2168

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.6	6.1e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_023005708.1 52 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
MQIDSILSSN SETHLLSETI IAHVGDQGIA ASTPERVVEP LPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KTVRKRPLQG ENCPPPMPNA 180 VSNQSRALGH DGRAVKLVLV DTQNIPKLGH RKTASRRNVN VGINRGNNGG YPTVLKPSRQ 240 RRKSGGVSSA AYKKWEKAAI AGVSLVADAA EHLERTITNR DVLHDQNTVE EKNSDPAGSP 300 LLLLAPLQPN SLIDVANTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH 360 LSRKWGNSSA AHGALMLFPY SMQKKCLAEC QRWTQDSFES AGDVYAAIGR PQVFRLRYGW 420 CSNAEHGSPE LQTSVPAYCI QDDHIIDARD INGRIVDLAS IDDQPVGLNK DEVGTLNDNM 480 STPTVPNETE RFICGRLDDL PRSSDPTLNI SWDKKDVADR TFIQRSDDVD DLKLSNETSL 540 SAGEWADSLT NINIGDLLSG VSQDVDPNCI DTPLAEGIQC LQQIPFSCDS FDAAIAAHIS 600 RQQDKTVSQP TLASHVSSIW DAEETCDAFS FQKNPVILQE VPSSSPFSSL QGYKHIARTY 660 SMESSHMTEE LLSDSPPEDH NQGDPMDECQ SDPQISETKD LNELTDIYWP DSLGPLDLDL 720 PSTNKYHSED LILGDSLSSL NRLIASSLDA FQNCSFFGFD KKESSTFNS

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

MQIDSILSSN SETHLLSETI IAHVGDQGIA ASTPERVVEP LPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KTVRKRPLQG ENCPPPMPNA  180
VSNQSRALGH DGRAVKLVLV DTQNIPKLGH RKTASRRNVN VGINRGNNGG YPTVLKPSRQ  240
RRKSGGVSSA AYKKWEKAAI AGVSLVADAA EHLERTITNR DVLHDQNTVE EKNSDPAGSP  300
LLLLAPLQPN SLIDVANTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH  360
LSRKWGNSSA AHGALMLFPY SMQKKCLAEC QRWTQDSFES AGDVYAAIGR PQVFRLRYGW  420
CSNAEHGSPE LQTSVPAYCI QDDHIIDARD INGRIVDLAS IDDQPVGLNK DEVGTLNDNM  480
STPTVPNETE RFICGRLDDL PRSSDPTLNI SWDKKDVADR TFIQRSDDVD DLKLSNETSL  540
SAGEWADSLT NINIGDLLSG VSQDVDPNCI DTPLAEGIQC LQQIPFSCDS FDAAIAAHIS  600
RQQDKTVSQP TLASHVSSIW DAEETCDAFS FQKNPVILQE VPSSSPFSSL QGYKHIARTY  660
SMESSHMTEE LLSDSPPEDH NQGDPMDECQ SDPQISETKD LNELTDIYWP DSLGPLDLDL  720
PSTNKYHSED LILGDSLSSL NRLIASSLDA FQNCSFFGFD KKESSTFNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein