PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005508.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 265aa MW: 29894.5 Da PI: 6.715

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.8	4.5e-19	98	152	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q +Le+ F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k XP_023005508.1 98 RKKLRLTKDQSAVLEDSFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 152 78889************************************************98 PP
2	HD-ZIP_I/II	130.3	7.7e-42	98	187	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k+q+++LE+sF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l XP_023005508.1 98 RKKLRLTKDQSAVLEDSFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 187 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MMSSKHDNLS LSLGLSFDSH YLQLNLRPSW NDHASSDRTS ENRMPPSPVD CEEEEEEEEA 60 AVSSPNSTVS TVSGKRSEPE TNNGEDLDGD EEDAETSRKK LRLTKDQSAV LEDSFKEHNT 120 LNPKQKLALA KQLGLRPRQV EVWFQNRRAR TKLKQTEVDC EFLKRCCENL TEENRRLQKE 180 VQELRALKLS PQFYMHMAPP TTLTMCPSCE RVAVPSSTSA PLNVTRMGPA QAQAQSKALH 240 ARPIHVNPWA PAIPARPFNA LHPRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	103	SRKKLRL
2	147	155	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	7e-74	HD-ZIP family protein