PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005500.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 282aa    MW: 33060 Da    PI: 6.6489
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.43.8e-5571381129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+++yL+kkv +k++++ +vik++d+yk+ePwdL++  ++ + ++++wyfFs++dkky+t++r+nratk+g+Wkatg+dk++
  XP_023005500.1   7 VPPGFRFHPTDEELIDYYLRKKVGSKRIDI-DVIKDIDLYKIEPWDLQElcRMGGqDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAI 100
                     69****************************.99**************9545554425559*********************************** PP

             NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +s+ ++ l+g++ktLvfy+grap+g+k+dW+mheyrle
  XP_023005500.1 101 YSRyGHGLIGMRKTLVFYRGRAPNGQKSDWIMHEYRLE 138
                     **988889****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MNTILHVPPG FRFHPTDEEL IDYYLRKKVG SKRIDIDVIK DIDLYKIEPW DLQELCRMGG  60
QDQEDWYFFS HKDKKYPTST RTNRATKEGF WKATGRDKAI YSRYGHGLIG MRKTLVFYRG  120
RAPNGQKSDW IMHEYRLETS ENGAPQEEGW VVCKVFKKKM TTAQKMGDYE SPYWQDDQIS  180
FMPQIDSPNQ ISHPCKHEID HLHFAVFDDA FPQLPRHLEL NSDMSSCSYD PRSNAPSSSQ  240
TFFHGVDNKL MDWQAMDRYV ASQLSTDRDE ANYSHPTKYA SE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62700.11e-105NAC family protein