PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005444.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 383aa    MW: 42403.5 Da    PI: 6.0885
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005444.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.83.8e-08141161526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck G++C FaHg
  XP_023005444.1 141 ACPDFRK-GSCKKGESCEFAHG 161
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MVIGQRHRPG PLLHITPLMI PDEPANETRL PFPLSGISVS SDDNANGGDY SPYHLQEVLA  60
AFQQYLPSTS ESEIESDLEL SGRESDVPVD AYSCDQFRIF EFKVRKCTRG RSHDWTECPY  120
AHPGEKARRR DPRKYHYSGT ACPDFRKGSC KKGESCEFAH GVFECWLHPA RYRTQPCKDG  180
INCRRRVCFF AHTPEQLRVL PQQSPRDANS PDSYDESPLR QCLDGTCAKS LPFLSSPLSV  240
SPSATPVDSP PISPMTRSLA RSLGSSSVNE IVASLHMHLS KVNSLPSSWN VQIGSPGYPS  300
RIRPGFCSLP TTPTQPPTGP GVGLLDFTDH GFVEEPAMER VESGRELRAK MLQKLSEENS  360
LDLADSGPSD CTPDVEWVSD LVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-101C3H family protein