PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023005380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GATA | ||||||||
Protein Properties | Length: 510aa MW: 57387.1 Da PI: 6.2447 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.1 | 3.7e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_023005380.1 7 CYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGS 41 ****************55555***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 510 aa Download sequence |
MGKQGPCYHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG SLANYTPLHA RADPDEYDDK 60 RLSRLKNSSM YKNKEVKLLK RKHYQDHEVV VGVIPDHAQS FHKAVDEDTS NRSSSGSAIS 120 NSESCAQFGG ADGSDLTGPS QSTAWESMVP SRKRTCVDHP KSTAVEKLTK DLYTILREQQ 180 SYFSGSSEED LLFESETPMV SVEIGHGSIL MRHPSSIARE EESEASSFSV DHKHFSVNEA 240 YSESSIVPST LGIGRKHSNG QAFLQEQIKK DRPQLEKVQA LGNHNSPLCN IDLTVILNFR 300 EFTKQLTCED QRELMKYLPS VDTEELPDSL NSMFESPQFK ENLNSFKQLL TEGVFDFSFL 360 GAKREDCKTL SRLVLWDLSK SKWVEQYDRL KKCSTSFVDD KRLLDAQNKK FSETRITMMS 420 PRRVTTKTSV ESKELIDDSC CFSPRSLFAL PSDGSSFTLE SLHFDEDSFD QDLLLDVRSN 480 SSFPQAELLS FGGEQASNSS SSINLRLMHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.3 | 1e-148 | GATA family protein |