PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005372.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 469aa MW: 51849.8 Da PI: 7.1613

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.1	7.2e-36	50	192	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_023005372.1 50 LPAGVKFDPTDQELI-EHLEAKVKAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVSRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 142 799**********.99*****5553334444434666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_023005372.1 143 ETRWHKTGKTRPVMA-SGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 192 778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MRNSKIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGGRPDWVGL PAGVKFDPTD 60 QELIEHLEAK VKAKDMKSHP LIDEFIPTIE GEDGICYTHP EKLPGVSRDG LSRHFFHRPS 120 KAYTTGTRKR RKIQTECDLQ GGETRWHKTG KTRPVMASGK QKGCKKILVL YTNFGKNRKP 180 EKTNWVMHQY HLGQHEEEKE GELVVSKIFY QTQPRQCNWS DRSLAAAETG FEVAASGSCS 240 SMAQADEMSP AGGGVGASIS SFSSLDIQHL KSDHFGFGPF RTTSFDEVGL EEGSTGRKMG 300 MKGRTSGGAC SSSGEFELRD HHHQLVVAHN DHHRSIVHHH LPTAAFHISN HPSHQISAII 360 SPPPPPPLLL LDHDSFHHPS PIIIQNQQFH QQEQQQQQQE EGESEHHKMG GRSASGLEEL 420 IMGCTSSSSS SIKHHPPESS ILSSREADQW MKYSSFWPES DNPNLHGHG

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MRNSKIGSIV GGGSDSLLDA KLEQHQMCGS KHCPGCGHKL EGGRPDWVGL PAGVKFDPTD  60
QELIEHLEAK VKAKDMKSHP LIDEFIPTIE GEDGICYTHP EKLPGVSRDG LSRHFFHRPS  120
KAYTTGTRKR RKIQTECDLQ GGETRWHKTG KTRPVMASGK QKGCKKILVL YTNFGKNRKP  180
EKTNWVMHQY HLGQHEEEKE GELVVSKIFY QTQPRQCNWS DRSLAAAETG FEVAASGSCS  240
SMAQADEMSP AGGGVGASIS SFSSLDIQHL KSDHFGFGPF RTTSFDEVGL EEGSTGRKMG  300
MKGRTSGGAC SSSGEFELRD HHHQLVVAHN DHHRSIVHHH LPTAAFHISN HPSHQISAII  360
SPPPPPPLLL LDHDSFHHPS PIIIQNQQFH QQEQQQQQQE EGESEHHKMG GRSASGLEEL  420
IMGCTSSSSS SIKHHPPESS ILSSREADQW MKYSSFWPES DNPNLHGHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-138	NAC family protein