PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005361.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 551aa MW: 61434.8 Da PI: 6.389

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86.6	2.5e-27	306	359	2	56
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++Wt eLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_023005361.1 306 LKVDWTAELHRKFVQAVEQL-GVNQAIPSRILELMKVEGLTRHNVASHLQKYRMH 359 5899**************.9*****************************96 PP
2	Myb_DNA-binding	42.6	1.4e-13	308	357	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023005361.1 308 VDWTAELHRKFVQAVEQLGVNqaIPSRILELMKvEGLTRHNVASHLQKYR 357 57***********************************************7 PP
3	Response_reg	23	4e-09	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ d + + + +++ le+ +y +v + + +al + + +++ ++ ++ ++ dG +k +++ + +lp i+++ +++ +++ +G XP_023005361.1 20 VLLLDGDSNSAAEIKTKLEEMEY-VVVTYCNENDALLAISSEPetFHVAIVEVMASDHDGA--FKFLEAVK-DLPTILISNIHCLSTMMKCIALG 110 6788888888999999*****.888888888888888555445********8883..44444444.699*9999******* PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp+++++l++ XP_023005361.1 111 AIEFLQKPVSKDKLRN 126 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MVCTASDLHG WKDFPKGLRV LLLDGDSNSA AEIKTKLEEM EYVVVTYCNE NDALLAISSE 60 PETFHVAIVE VMASDHDGAF KFLEAVKDLP TILISNIHCL STMMKCIALG AIEFLQKPVS 120 KDKLRNIWQH VVHKAFNAGG SAVPSSLKPI KESVASILHL ELENNENKNQ VPHELEISSG 180 DNVDDHELLL LPEGSDKYPA PSTPQQKHGM RLVDQMNCLL EKECGEQDRE ESKSVETTCT 240 AQVENSQLSD KEVIKEEENS TDGCGAASNV DHELHDRDNI SSSEKNKSKA CGLGNPCRMK 300 VSGKKLKVDW TAELHRKFVQ AVEQLGVNQA IPSRILELMK VEGLTRHNVA SHLQKYRMHK 360 RHVLPKEEDG SWSSSKDPMR KNYYPHLQRP VMAYPSPYHS NHVMPVAPIG SWGHMACPSP 420 GVQMWAPPSY PPWRPPETWP WKSYLGVHGE AWGCPVTPPP PHSPFSSNPH HISRFEYVDV 480 HDKSYGIAPS PVDLQLADEE IDKAVKEAIS KPWLPLPLGL KPPSTESVLS ELSRQQISTT 540 PFHINGSKLL H

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MVCTASDLHG WKDFPKGLRV LLLDGDSNSA AEIKTKLEEM EYVVVTYCNE NDALLAISSE  60
PETFHVAIVE VMASDHDGAF KFLEAVKDLP TILISNIHCL STMMKCIALG AIEFLQKPVS  120
KDKLRNIWQH VVHKAFNAGG SAVPSSLKPI KESVASILHL ELENNENKNQ VPHELEISSG  180
DNVDDHELLL LPEGSDKYPA PSTPQQKHGM RLVDQMNCLL EKECGEQDRE ESKSVETTCT  240
AQVENSQLSD KEVIKEEENS TDGCGAASNV DHELHDRDNI SSSEKNKSKA CGLGNPCRMK  300
VSGKKLKVDW TAELHRKFVQ AVEQLGVNQA IPSRILELMK VEGLTRHNVA SHLQKYRMHK  360
RHVLPKEEDG SWSSSKDPMR KNYYPHLQRP VMAYPSPYHS NHVMPVAPIG SWGHMACPSP  420
GVQMWAPPSY PPWRPPETWP WKSYLGVHGE AWGCPVTPPP PHSPFSSNPH HISRFEYVDV  480
HDKSYGIAPS PVDLQLADEE IDKAVKEAIS KPWLPLPLGL KPPSTESVLS ELSRQQISTT  540
PFHINGSKLL H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-125	ARR-B family protein