PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004853.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 686aa MW: 75459.4 Da PI: 5.8866

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00048	518	555	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq XP_023004853.1 518 RQLIQDRIKELRELVPNgA------KCSIDSLLERTIKHMLFLQ 555 67799************77......6677779999999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MGTTDLHQIL KSLCCNSEWK YAVFWKLKHR ARMVLTWEDG YYDNSEQHDL PESKFYSKTI 60 EKFHDGCYSH DALGLAVAKM SYHVYSLGEG IVGQVAVTGK YQWITADEQI PNFSSTLEYC 120 DGWQTQFSAG IKTIVVAAVV PHGVLQLGSL DKVTEDVNLV ACIRNVFLTL QESSAGHIQP 180 MRSCESSGYV ADIPSRSLAT EKNEVEMVSK DVGIELSGSG GIKSLEIKPD AINMDSFKSQ 240 VRVLDDRICG GEPSECKDIA VGLKQKINVG SQNFEMGTVN LSGPAEKIIT DEAYFPMNPH 300 ASSVCGLKHD GMCSQTNPSE MYLQNDVEAS ETINVYPSNS SLKFPAGYEL HEVLGPAFLK 360 DALYLDWKTK YVFGGKAFEL SEGTNGSHLT SDSPTEHLLE AVVADVCHSG SDVKSDTSLC 420 KSGQSLLTTE RIPEPSTNVT STCSEGYTMG QSQTSFIGEE MQNSLSSSGV CGVMSTKGFS 480 STYSGTGSEH LEQFSEPAKN SKRRARPGES CRPRPRDRQL IQDRIKELRE LVPNGAKCSI 540 DSLLERTIKH MLFLQGITKH AGKLNKCANM KLHQKKNGML GSSSTDQGSS WAVEVGGQLK 600 VCSIIVENLN KNGQILVEML CEECSHFLEI AEAIRSLGLI ILRGITEAHG DKTWICFVVE 660 GENNRNIHRM DILWSLVQIL QRSNTM

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MGTTDLHQIL KSLCCNSEWK YAVFWKLKHR ARMVLTWEDG YYDNSEQHDL PESKFYSKTI  60
EKFHDGCYSH DALGLAVAKM SYHVYSLGEG IVGQVAVTGK YQWITADEQI PNFSSTLEYC  120
DGWQTQFSAG IKTIVVAAVV PHGVLQLGSL DKVTEDVNLV ACIRNVFLTL QESSAGHIQP  180
MRSCESSGYV ADIPSRSLAT EKNEVEMVSK DVGIELSGSG GIKSLEIKPD AINMDSFKSQ  240
VRVLDDRICG GEPSECKDIA VGLKQKINVG SQNFEMGTVN LSGPAEKIIT DEAYFPMNPH  300
ASSVCGLKHD GMCSQTNPSE MYLQNDVEAS ETINVYPSNS SLKFPAGYEL HEVLGPAFLK  360
DALYLDWKTK YVFGGKAFEL SEGTNGSHLT SDSPTEHLLE AVVADVCHSG SDVKSDTSLC  420
KSGQSLLTTE RIPEPSTNVT STCSEGYTMG QSQTSFIGEE MQNSLSSSGV CGVMSTKGFS  480
STYSGTGSEH LEQFSEPAKN SKRRARPGES CRPRPRDRQL IQDRIKELRE LVPNGAKCSI  540
DSLLERTIKH MLFLQGITKH AGKLNKCANM KLHQKKNGML GSSSTDQGSS WAVEVGGQLK  600
VCSIIVENLN KNGQILVEML CEECSHFLEI AEAIRSLGLI ILRGITEAHG DKTWICFVVE  660
GENNRNIHRM DILWSLVQIL QRSNTM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-145	bHLH family protein