PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004742.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 359aa MW: 40561.6 Da PI: 7.8219

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.4	2.3e-15	48	107	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d +n k+ ++++lg ++ +e Aa a++ a++k++g XP_023004742.1 48 SVYRGVTRHRWTGRYEAHLWDkNFWNEgqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 107 78*****************877744467456***********************98 PP
2	AP2	52.6	1.2e-16	150	201	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ + +g XP_023004742.1 150 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAARAYDLAAIEHRG 201 89**99******99966...3.6********************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MAKISHSPHE NSISTTADPS HSSPIHQSKA LKRTRKSVRR DAPAQRSSVY RGVTRHRWTG 60 RYEAHLWDKN FWNEGQNKKG RQVYLGAYDD EEAAAHAYDL AALKYWGAET VINFPRLTYQ 120 DELKEMEGQS REEYIRYLRR KSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNKYLYLG 180 TYATQEEAAR AYDLAAIEHR GLNAVTNFDI SRYIKCLRPG EQHIPDNDRP SSPNAGDTAS 240 EFDPKSPLEI TFPSQYSSSD QPTTAPEPHG GHPSSSSATL ELLLHSSKFK HILERTSAAE 300 TSQTLPESVR PRRCIPDDIQ TYFDCSTQDS DDIAGSDDGI FGYLNSYFPS SVFHSALDA

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MAKISHSPHE NSISTTADPS HSSPIHQSKA LKRTRKSVRR DAPAQRSSVY RGVTRHRWTG  60
RYEAHLWDKN FWNEGQNKKG RQVYLGAYDD EEAAAHAYDL AALKYWGAET VINFPRLTYQ  120
DELKEMEGQS REEYIRYLRR KSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNKYLYLG  180
TYATQEEAAR AYDLAAIEHR GLNAVTNFDI SRYIKCLRPG EQHIPDNDRP SSPNAGDTAS  240
EFDPKSPLEI TFPSQYSSSD QPTTAPEPHG GHPSSSSATL ELLLHSSKFK HILERTSAAE  300
TSQTLPESVR PRRCIPDDIQ TYFDCSTQDS DDIAGSDDGI FGYLNSYFPS SVFHSALDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	2e-95	AP2 family protein