PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004551.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 420aa    MW: 47360.6 Da    PI: 6.403
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004551.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH253.2e-084969526
                    --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                     C ++++ G C +G+rC++ H+
  XP_023004551.1 49 VCTYYQK-GRCAFGSRCRYDHV 69
                    6******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MVFFCLDVPS RVILIMVLWV LCKYFAHGAC LKGEYCEFSH DWTAPPSNVC TYYQKGRCAF  60
GSRCRYDHVK ASHAESSASS NSQQPHMSES VSIAHTLLSS PLSPSPGSTI ELAGSKISCL  120
PSHVESAWSV ECELPSGLDD WGSRETRIIS PADLPICSFS AAGTNCPRGD NCPHIHGDLC  180
PTCGKQCLHP FRTDEREEHM KACEKKQKHL ESLKHSQEIE CSVCLERVLS KTEIAERKFG  240
LLSECDHPFC ISCIRNWRNS SSTSGMDVNS ALRACPICRK LSYFVIPSVI WYSSKEEKQE  300
IVDSYKSKLR SIDCKHFNFG NGNCPFGSSC FYKHLVKPGS YTWKYHRPPP HRPRSQRTPP  360
SRSNIVDMDA FFDMFQDLED LDFSAEDLDF EELTPLEMAF VLMQLGCEAN LSSDEENYSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-134C3H family protein