PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023004541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 443aa MW: 49770.4 Da PI: 9.8986 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.5 | 3.1e-08 | 129 | 170 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eE ++l d+++++ + + Ia +++ +Rt +++k+r++ XP_023004541.1 129 SWTKEETDQLFDLCERFDLR-FVVIADRFPSTRTVEELKERYY 170 7*******************.*********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 443 aa Download sequence |
MDAKDILGLP KNTLHIPQEK KSRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK 60 RPPSDEKITW QWLPFANSGR KDNLQLYHWV RVVNGIPPTG DYSFAKYNKS VEIVKYTDED 120 YEKYLNEPSW TKEETDQLFD LCERFDLRFV VIADRFPSTR TVEELKERYY RASRAILAAR 180 EPMPRESSGN PLAKDPYNVS QETERKRALS MVLSQTKQQE RKDAEVLAEA KKITESRRDE 240 RVPEKSELPV TLNAVPGATE RAVVPGDSVP SVSNVQPPTP AAAPSTLVAD NASTLASLRM 300 LPVYLRTYAL EQMVQAASSS AGLRTIKRVE QTLQDLSVNL KPRVPTKSVC AEHLELRKEI 360 LTLLNLQKQL QNKEAEGSSF REGPYNEAPG TPKDRSFIPD SMSSGGERSG KRDQKRKATG 420 RLSEAPSPPA QTKRPRKQKG SDL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 20 | 32 | KKSRAQKDAQRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47210.1 | 0.0 | MYB_related family protein |