PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004539.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 443aa MW: 49770.4 Da PI: 9.8986

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.5	3.1e-08	129	170	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eE ++l d+++++ + + Ia +++ +Rt +++k+r++ XP_023004539.1 129 SWTKEETDQLFDLCERFDLR-FVVIADRFPSTRTVEELKERYY 170 7*****************.*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MDAKDILGLP KNTLHIPQEK KSRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK 60 RPPSDEKITW QWLPFANSGR KDNLQLYHWV RVVNGIPPTG DYSFAKYNKS VEIVKYTDED 120 YEKYLNEPSW TKEETDQLFD LCERFDLRFV VIADRFPSTR TVEELKERYY RASRAILAAR 180 EPMPRESSGN PLAKDPYNVS QETERKRALS MVLSQTKQQE RKDAEVLAEA KKITESRRDE 240 RVPEKSELPV TLNAVPGATE RAVVPGDSVP SVSNVQPPTP AAAPSTLVAD NASTLASLRM 300 LPVYLRTYAL EQMVQAASSS AGLRTIKRVE QTLQDLSVNL KPRVPTKSVC AEHLELRKEI 360 LTLLNLQKQL QNKEAEGSSF REGPYNEAPG TPKDRSFIPD SMSSGGERSG KRDQKRKATG 420 RLSEAPSPPA QTKRPRKQKG SDL

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MDAKDILGLP KNTLHIPQEK KSRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK  60
RPPSDEKITW QWLPFANSGR KDNLQLYHWV RVVNGIPPTG DYSFAKYNKS VEIVKYTDED  120
YEKYLNEPSW TKEETDQLFD LCERFDLRFV VIADRFPSTR TVEELKERYY RASRAILAAR  180
EPMPRESSGN PLAKDPYNVS QETERKRALS MVLSQTKQQE RKDAEVLAEA KKITESRRDE  240
RVPEKSELPV TLNAVPGATE RAVVPGDSVP SVSNVQPPTP AAAPSTLVAD NASTLASLRM  300
LPVYLRTYAL EQMVQAASSS AGLRTIKRVE QTLQDLSVNL KPRVPTKSVC AEHLELRKEI  360
LTLLNLQKQL QNKEAEGSSF REGPYNEAPG TPKDRSFIPD SMSSGGERSG KRDQKRKATG  420
RLSEAPSPPA QTKRPRKQKG SDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	32	KKSRAQKDAQRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein