PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004215.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 934aa MW: 104838 Da PI: 6.3009

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	174.2	1.8e-54	12	127	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e+ iL+n+ek++lt+e++++p+sgsl+L+n++++r+frkDG+sw+kk+dg+tv E+he+LKvg+ e+l+cyYah+e+np+fqr XP_023004215.1 12 REaQTRWLKPPEVFFILQNYEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQR 106 55599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+ ++++ivlvhy++ XP_023004215.1 107 RSYWMLDPSFDHIVLVHYRDI 127 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 934 aa Download sequence
MNVGYDINDL YREAQTRWLK PPEVFFILQN YEKYQLTEEA PKQPTSGSLF LFNKRVLRFF 60 RKDGHSWRKK RDGRTVGEAH ERLKVGNAEA LNCYYAHGEH NPNFQRRSYW MLDPSFDHIV 120 LVHYRDIKEG RPGTESVPQL SPASASTFGS HSSQSFALEH RQSSLSPGSV EVSSDTGNRT 180 VGSNSADGQH EISELKNECE VSQALRRIEE QLSLNEDSLK VIDPFYGHEE GSNSNLIDYY 240 EMSNDDQFSV LQHSENAIHD NNYTSFEIQD ANEKHSDYAM AHEIMFDSEG TQPWGYALGS 300 RKTADLESQD RQSLLWNENE KSSSSLSKST TVDNEHYNLV HRRGKTSALL GSCTSSEYTS 360 PLDNHDVNSS YHIPFLKEDH GNSFEVDTGL IVPQVQKFMI RQIVPEKGYA TENTKVIIIG 420 SFLCDPSESP WACMFGDIEV PLQIVQNGTL YCEAPPHLPG KVSFCITSGN REPCSEFREF 480 EYKMNVCSHC YSHSSGATKS PEELLLLVRL VQLLLSDSNT VNSEVRSNYV KAGDDQWSSL 540 IEGLLVGSET PSDTVDWLLQ ELLKDKLHLW LASQPKDRHD LAGCSLSKKE QGIIHMIAGL 600 GYVWALNPIL SCGVNINFRD INGWTALHWA ARFGREKMVA SLIASGASAG SVTDPSAQDP 660 DGKTAASIAD IHGHKGLAGY LSEVALTTHL SSLTFEEGEL SKGSAEVEAE MTVNSISEGN 720 HTSTEDYTPL SDTLAAVRNA AQAAARIQSA FRAHSFRKRR QKEAVFAACI DEYGIDPNDI 780 QGLLAMSKLK FSNRRDCNAA ALSIQKKYRG WKGRQEFLSI RQKVVKIQAH VRGHQVRKHY 840 KIICWAVGIL DKVVLRWRRK GVGLRGFRSD IESIDENEDD DIIKVFRKEK VEVTIDEAVS 900 RVRSMVNSLD ACQQYHRTLK GFREAKAELN GADR

Sequence ? help Back to Top

Protein Sequence Length: 934 aa Download sequence

MNVGYDINDL YREAQTRWLK PPEVFFILQN YEKYQLTEEA PKQPTSGSLF LFNKRVLRFF  60
RKDGHSWRKK RDGRTVGEAH ERLKVGNAEA LNCYYAHGEH NPNFQRRSYW MLDPSFDHIV  120
LVHYRDIKEG RPGTESVPQL SPASASTFGS HSSQSFALEH RQSSLSPGSV EVSSDTGNRT  180
VGSNSADGQH EISELKNECE VSQALRRIEE QLSLNEDSLK VIDPFYGHEE GSNSNLIDYY  240
EMSNDDQFSV LQHSENAIHD NNYTSFEIQD ANEKHSDYAM AHEIMFDSEG TQPWGYALGS  300
RKTADLESQD RQSLLWNENE KSSSSLSKST TVDNEHYNLV HRRGKTSALL GSCTSSEYTS  360
PLDNHDVNSS YHIPFLKEDH GNSFEVDTGL IVPQVQKFMI RQIVPEKGYA TENTKVIIIG  420
SFLCDPSESP WACMFGDIEV PLQIVQNGTL YCEAPPHLPG KVSFCITSGN REPCSEFREF  480
EYKMNVCSHC YSHSSGATKS PEELLLLVRL VQLLLSDSNT VNSEVRSNYV KAGDDQWSSL  540
IEGLLVGSET PSDTVDWLLQ ELLKDKLHLW LASQPKDRHD LAGCSLSKKE QGIIHMIAGL  600
GYVWALNPIL SCGVNINFRD INGWTALHWA ARFGREKMVA SLIASGASAG SVTDPSAQDP  660
DGKTAASIAD IHGHKGLAGY LSEVALTTHL SSLTFEEGEL SKGSAEVEAE MTVNSISEGN  720
HTSTEDYTPL SDTLAAVRNA AQAAARIQSA FRAHSFRKRR QKEAVFAACI DEYGIDPNDI  780
QGLLAMSKLK FSNRRDCNAA ALSIQKKYRG WKGRQEFLSI RQKVVKIQAH VRGHQVRKHY  840
KIICWAVGIL DKVVLRWRRK GVGLRGFRSD IESIDENEDD DIIKVFRKEK VEVTIDEAVS  900
RVRSMVNSLD ACQQYHRTLK GFREAKAELN GADR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein