PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003991.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 365aa MW: 40985.1 Da PI: 6.8427

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	293	327	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ XP_023003991.1 293 KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRH 327 569*****************************885 PP
2	ELK	41.1	3.6e-14	247	268	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsg+LgsLkqEF+ XP_023003991.1 247 ELKGQLLRKYSGCLGSLKQEFM 268 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MDGPGGSSSG MMNFGDQNNS NNGLCSSMMM MMPLMSSHQH HHHHHHHHHQ GDACNPFPPL 60 PSPNYTTNNI SNTNTSSSSN PICYLMDENT TINNNNNNDN GCGHANSSSC ELKAKIMGHP 120 HYHRLLAAYV NCRKVGAPPE VVARLEGACA SALTMSGTSC TGCIGEDPAL DQFMEAYCEM 180 LTKYEQELSK PFRDAMLFLH RIECQFKALS ISSSDAVCGE AFERNGSSEE EVDINGHSID 240 PQAEDRELKG QLLRKYSGCL GSLKQEFMKK RKKGKLPKEA RQQLLDWWSR HYKWPYPSES 300 QKLALAQSTG LDQKQINNWF INQRKRHWKP SEDMQFVVMD GGHPQYYMDT MLGNPFPLDI 360 SPTLL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MDGPGGSSSG MMNFGDQNNS NNGLCSSMMM MMPLMSSHQH HHHHHHHHHQ GDACNPFPPL  60
PSPNYTTNNI SNTNTSSSSN PICYLMDENT TINNNNNNDN GCGHANSSSC ELKAKIMGHP  120
HYHRLLAAYV NCRKVGAPPE VVARLEGACA SALTMSGTSC TGCIGEDPAL DQFMEAYCEM  180
LTKYEQELSK PFRDAMLFLH RIECQFKALS ISSSDAVCGE AFERNGSSEE EVDINGHSID  240
PQAEDRELKG QLLRKYSGCL GSLKQEFMKK RKKGKLPKEA RQQLLDWWSR HYKWPYPSES  300
QKLALAQSTG LDQKQINNWF INQRKRHWKP SEDMQFVVMD GGHPQYYMDT MLGNPFPLDI  360
SPTLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	272	LKQEFMKKRK
2	269	273	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-131	TALE family protein