PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023003986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 457aa MW: 52789.8 Da PI: 6.4084 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.4 | 3.9e-14 | 200 | 235 | 12 | 48 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 lv++v+q+G++ W+ Ia+t++ gR +kqc++rw+++l XP_023003986.1 200 LVQLVEQYGTRKWSHIAQTLP-GRIGKQCRERWHNHL 235 9********************.*************97 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.9e-17 | 241 | 283 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd l++a+++ G++ W+ Ia++++ gRt++++k++w+ XP_023003986.1 241 KDTWSEEEDRVLIEAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 283 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 457 aa Download sequence |
MELESNLTEN LSSNQACKED ELSFQFLASK GNYLHEFHHL DSSSNPILED ENMCSLDHFN 60 PYSYGCSSNN SNTAVEDLYE LNKACADQNG GCGQVMDNFQ SSGDYYNFHQ MNQIDVTGLE 120 RNSIPLDFPD VKPVNFFVPD EVSCITSGNG HFQKATMNKN VNFSSLLRTS KGQKKPNVIK 180 GQWTVEEDRF DICVEKNRVL VQLVEQYGTR KWSHIAQTLP GRIGKQCRER WHNHLRPDIK 240 KDTWSEEEDR VLIEAHAEIG NKWAEIAKRL PGRTENSIKN HWNATKRRQY SKRKCRSKYP 300 RCSLLQDYIK SLDSNTTRHQ KKICPTDTKS KSKLADRRHR QPQSANFCPN DWTVPNSDLK 360 DEAEFYLDDN FFREGCSIDT LMENIAAASA DDANNYDRKR YHGNEELVEF HHRSIVEMEK 420 LQNCAPVKTA AAMEFEVTKE LDLVEMMSQV NEVNKMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 1e-91 | MYB family protein |