PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023003765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRF | ||||||||
Protein Properties | Length: 569aa MW: 61844.9 Da PI: 7.5929 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 76.7 | 2.3e-24 | 222 | 266 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_023003765.1 222 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRKPVEG 266 79****************************************985 PP | |||||||
2 | QLQ | 56.4 | 9.3e-20 | 154 | 189 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT +Q+ +L++Q+l+yKyL++n+PvP++Ll +++k XP_023003765.1 154 PFTQSQWIELEHQALIYKYLSSNVPVPSNLLIPLKK 189 9*******************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 569 aa Download sequence |
MDFGVVGLDS FVDSSDAPSP YPETKLKSLG SAFSKQDRSG FVDDDDWSNS KIPKTDTTLS 60 ASKTMPLHQG FPLLRSNALL STDGRQKEHM LSFSSLKSDT SLQTKDSELI ARNLQTSIYP 120 YHQHKSSPYS RNTGCVSGSY SGSMHGAVAG IRAPFTQSQW IELEHQALIY KYLSSNVPVP 180 SNLLIPLKKS LYPYGLTCSS AGSLPPNTRW GSFHLGFSGN TDPEPGRCRR TDGKKWRCSR 240 DAVADQKYCE RHINRGRHRS RKPVEGQTGH SVPGTTNPTA MVATMTTSLS STVMPSGGAS 300 NNNLPIIQHQ HQLKSLHPGA ASNPGVDAPV NRLLNKETVC SRIQEPGGLS MMSSTVNLMS 360 SSDKSGAKHE ISLGESTQSE FGLVSTDSLL NPSQRGSYAN PKNFDSFLIF NDQETQDQAQ 420 HPLRQFCEDW PKDQSSRSVM TWPEEFKSDW TQLSMSIPMS NFSSSSSSPT QEKLVQSPLR 480 LSKEEVEPMD MNLGVSRNDG EVAQKQMSWG GSMGGPLGEA LTNANSCVKE SKVPPSLNLL 540 AEGWDGGQLG SSPTGVLQKA TFCSLSNSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22840.1 | 1e-103 | GRF family protein |