PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003740.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 633aa MW: 69848.6 Da PI: 7.2041

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51	3.6e-16	288	347	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_023003740.1 288 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 347 78*****************988886678446***********************98 PP
2	AP2	46.9	6.7e-15	390	441	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_023003740.1 390 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 441 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MNNVNGNNCN WLGFSVSPNV NMELSSSSAA AASPSIPANL FHSPSQYNYG IYYGVDGEHG 60 GFYSPLSVMP LKSDGSICSM EALSRQHPEA VSSSTPKLED FFGGATMGSH HYESNAREAI 120 ALSLDSIFCH QNPTHEPNNQ PYAHFSSLRS REVMLQDSKV ILPDGCNLQQ HPTVAESEIS 180 GMKNWAVPRG YAATDNSSFE QKMLSFMSEN GGESGPINAM AYGDLQSLSL SMTMSPSSQS 240 SCVTATQHVS PVMGDCSAMD SKKRIHEKLD QKQIVHRKSL DTFGQRTSQY RGVTRHRWTG 300 RYEAHLWDNS CKKEGQSRKG RQVYLGGYDM EEKAARAYDL AALKYWGPST HINFPLENYQ 360 KELEEMKNMS RQEYVAHLRR RSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG 420 TFSTQEEAAE AYDIAAIKFR GMNAVTNFDI TRYDVERIIA SNTLLSGDVA KRKQQPDFNN 480 ESLSESPPTH NSNAEASMPL PSQSSQSESD WKMALYQSSQ QQLIPKPRLL SAITDDGSQL 540 RVEDSAKMMG AHFSNASSMV TSCSLSSSRE ESPDKTSLSM VFGMPQPTSR PFAAPASNMN 600 SSSSSSSWIA SAQQLRAANC MSQLPVFAGW TDT

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MNNVNGNNCN WLGFSVSPNV NMELSSSSAA AASPSIPANL FHSPSQYNYG IYYGVDGEHG  60
GFYSPLSVMP LKSDGSICSM EALSRQHPEA VSSSTPKLED FFGGATMGSH HYESNAREAI  120
ALSLDSIFCH QNPTHEPNNQ PYAHFSSLRS REVMLQDSKV ILPDGCNLQQ HPTVAESEIS  180
GMKNWAVPRG YAATDNSSFE QKMLSFMSEN GGESGPINAM AYGDLQSLSL SMTMSPSSQS  240
SCVTATQHVS PVMGDCSAMD SKKRIHEKLD QKQIVHRKSL DTFGQRTSQY RGVTRHRWTG  300
RYEAHLWDNS CKKEGQSRKG RQVYLGGYDM EEKAARAYDL AALKYWGPST HINFPLENYQ  360
KELEEMKNMS RQEYVAHLRR RSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG  420
TFSTQEEAAE AYDIAAIKFR GMNAVTNFDI TRYDVERIIA SNTLLSGDVA KRKQQPDFNN  480
ESLSESPPTH NSNAEASMPL PSQSSQSESD WKMALYQSSQ QQLIPKPRLL SAITDDGSQL  540
RVEDSAKMMG AHFSNASSMV TSCSLSSSRE ESPDKTSLSM VFGMPQPTSR PFAAPASNMN  600
SSSSSSSWIA SAQQLRAANC MSQLPVFAGW TDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-142	AP2 family protein