PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003739.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 642aa MW: 70818.7 Da PI: 7.4948

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51	3.6e-16	288	347	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_023003739.1 288 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 347 78*****************988886678446***********************98 PP
2	AP2	32.6	2e-10	407	450	9	55
AP2 9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_023003739.1 407 HHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 450 456777**988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 642 aa Download sequence
MNNVNGNNCN WLGFSVSPNV NMELSSSSAA AASPSIPANL FHSPSQYNYG IYYGVDGEHG 60 GFYSPLSVMP LKSDGSICSM EALSRQHPEA VSSSTPKLED FFGGATMGSH HYESNAREAI 120 ALSLDSIFCH QNPTHEPNNQ PYAHFSSLRS REVMLQDSKV ILPDGCNLQQ HPTVAESEIS 180 GMKNWAVPRG YAATDNSSFE QKMLSFMSEN GGESGPINAM AYGDLQSLSL SMTMSPSSQS 240 SCVTATQHVS PVMGDCSAMD SKKRIHEKLD QKQIVHRKSL DTFGQRTSQY RGVTRHRWTG 300 RYEAHLWDNS CKKEGQSRKG RQVYLGGYDM EEKAARAYDL AALKYWGPST HINFPLENYQ 360 KELEEMKNMS RQEYVAHLRR RSSGFSRGAS IYRGVTRSNK SQLKALHHQH GRWQARIGRV 420 AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG MNAVTNFDIT RYDVERIIAS NTLLSGDVAK 480 RKQQPDFNNE SLSESPPTHN SNAEASMPLP SQSSQSESDW KMALYQSSQQ QLIPKPRLLS 540 AITDDGSQLR VEDSAKMMGA HFSNASSMVT SCSLSSSREE SPDKTSLSMV FGMPQPTSRP 600 FAAPASNMNS SSSSSSWIAS AQQLRAANCM SQLPVFAGWT DT

Sequence ? help Back to Top

Protein Sequence Length: 642 aa Download sequence

MNNVNGNNCN WLGFSVSPNV NMELSSSSAA AASPSIPANL FHSPSQYNYG IYYGVDGEHG  60
GFYSPLSVMP LKSDGSICSM EALSRQHPEA VSSSTPKLED FFGGATMGSH HYESNAREAI  120
ALSLDSIFCH QNPTHEPNNQ PYAHFSSLRS REVMLQDSKV ILPDGCNLQQ HPTVAESEIS  180
GMKNWAVPRG YAATDNSSFE QKMLSFMSEN GGESGPINAM AYGDLQSLSL SMTMSPSSQS  240
SCVTATQHVS PVMGDCSAMD SKKRIHEKLD QKQIVHRKSL DTFGQRTSQY RGVTRHRWTG  300
RYEAHLWDNS CKKEGQSRKG RQVYLGGYDM EEKAARAYDL AALKYWGPST HINFPLENYQ  360
KELEEMKNMS RQEYVAHLRR RSSGFSRGAS IYRGVTRSNK SQLKALHHQH GRWQARIGRV  420
AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG MNAVTNFDIT RYDVERIIAS NTLLSGDVAK  480
RKQQPDFNNE SLSESPPTHN SNAEASMPLP SQSSQSESDW KMALYQSSQQ QLIPKPRLLS  540
AITDDGSQLR VEDSAKMMGA HFSNASSMVT SCSLSSSREE SPDKTSLSMV FGMPQPTSRP  600
FAAPASNMNS SSSSSSWIAS AQQLRAANCM SQLPVFAGWT DT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-139	AP2 family protein