PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003674.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 256aa MW: 28355.4 Da PI: 8.6542

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.4	4.9e-18	107	161	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+ + +++ ++++ LA++l+L rqV vWFqNrRa+ k XP_023003674.1 107 RKKLRLTKEQSALLEESFKLHCTLNPKQKQALARELNLRPRQVEVWFQNRRARTK 161 788899***********************************************98 PP
2	HD-ZIP_I/II	124.1	6.6e-40	107	196	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq++lLEesF+ + +L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+ke +eL+ +l XP_023003674.1 107 RKKLRLTKEQSALLEESFKLHCTLNPKQKQALARELNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTDENRRLQKELQELK-AL 196 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MGFDDLPNTG LLLGLGLTLQ SKPACLSQKP NKPVDLFSFP AVESEPSLTL GLSTTADLCR 60 QPSPHSTVSS LSGGKVKRER DVSGEDIEEE KASSRVSDEE EDGSNARKKL RLTKEQSALL 120 EESFKLHCTL NPKQKQALAR ELNLRPRQVE VWFQNRRART KLKQTEVDCE FLKRCCETLT 180 DENRRLQKEL QELKALKLTK PLFMQMPAAT LTMCPSCERI GGATATVNGN GNPKGAFSMA 240 PKPQFYKPFT NPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	164	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	9e-84	HD-ZIP family protein