PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023003604.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 249aa MW: 25432.3 Da PI: 7.9714 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.8 | 1.2e-38 | 26 | 86 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s XP_023003604.1 26 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 86 57889****************************************************9876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 249 aa Download sequence |
MPSDAGDHLK TATKPLASGG VCPPPEQEHL PCPRCDSTNT KFCYYNNYNF SQPRHFCKSC 60 RRYWTHGGTL RDIPVGGGSR KNAKRSRTCI PAAAAATSVV SSSSGSLTNS VSQLDHHSLP 120 ATPFLVPLVG GHSGGLQFGG GGGGELKAGG NVCGSFTSLL NNHAPGFWSL GGFGLGLGSG 180 FEDVGYGAAS SRVAWPFLGL GDGSTGVGGH GGAANMWQFE NGDSAGFVGA ADCLSWPELA 240 ISTPGNGLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50410.1 | 4e-50 | Dof family protein |