PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023003550.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 328aa MW: 36998.6 Da PI: 6.5753 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.9 | 6.6e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l +++++ g +W++++++ g+ R++k+c++rw +yl XP_023003550.1 14 RGLWSPEEDEKLMKCIRKIEGQaCWSRVPKMAGLDRCGKSCRLRWINYL 62 788*****************99*************************97 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 2.8e-16 | 68 | 110 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +++eE+ ++d+++ lG++ W+ Ia++++ gRt++++k++w+ XP_023003550.1 68 RGCFSAEEERTIIDVHRILGNR-WAQIAKHLP-GRTDNEIKNFWN 110 899*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MGHHSCCTKV KVKRGLWSPE EDEKLMKCIR KIEGQACWSR VPKMAGLDRC GKSCRLRWIN 60 YLRPDLKRGC FSAEEERTII DVHRILGNRW AQIAKHLPGR TDNEIKNFWN SSIKKKLLAL 120 GLDPNTHNLL PARHQQQQQQ QQHHAAAAAA ANNNNNMNAY DDHYQIIGDV VNGSYVYNSN 180 NYTWLEEQQQ QQQLQTGSSC WGAPIVPGMM NWELFESGCG IVTGSSSNNS LDCDLGMMIE 240 RERLRRMWED EEADVGALIM PLATEEAAGS VVMQSQPQPQ PHNNHTTTAA AAAAAEFKDL 300 DFYFEESAVI PNPNPNPNPI NFNSNLQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 1e-69 | MYB family protein |