PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003496.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 200aa    MW: 22440.5 Da    PI: 7.088
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.8e-09108149854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_023003496.1 108 AARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 149
                     6799*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEPHHLPNPS SHLQFSAIDD PDIVHLHHVH ELSSIWPSLL PHQPLPTSST HLMSGYGNDQ  60
EEPEEELGAM KEMMYKIAAM QPVDIDPSTI RKPKRRNVRI SDDPQSIAAR LRRERISEKI  120
RILQRLVPGG TKMDTASMLD EAIRYVKFLK RQIQFLQSTQ PSTGDCAAAG GWPFPFHKAN  180
ASNSSSTSME ATPTIMPSGW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110115RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.13e-47bHLH family protein