PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023003417.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 236aa MW: 26504.9 Da PI: 9.5511 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.5 | 1.3e-07 | 26 | 69 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT d+++ +a + + + +W +Ia ++ g+++ ++++++ XP_023003417.1 26 PWTRHQDKIFEHALVMVPENspnRWMKIAGLVP-GKSAAEVRDHY 69 8******************9*************.**********9 PP | |||||||
2 | Myb_DNA-binding | 42.1 | 2e-13 | 117 | 162 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+ E++l++ + k++G+g+W++I+r + +Rt+ q+ s+ qky XP_023003417.1 117 KPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKY 162 58*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MEAPSSSFGL LDHYWSPTTS IPSPTPWTRH QDKIFEHALV MVPENSPNRW MKIAGLVPGK 60 SAAEVRDHYD ALVSDVQNID SGRVELPNYA DESLLSSPER ESPGQLPEKA SERKKGKPWT 120 KKEHQLFLLG LKKFGKGDWR SISRNVVITR TPTQVASHAQ KYFLRQESAK KDRKRSSIHD 180 ITTVECNLVT AVAATSEGQL SIFSLTHSPS PSFPLPLPHQ FSPASYFPNQ RSLLDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 2e-56 | MYB family protein |