PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003193.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 846aa    MW: 92846 Da    PI: 6.1407
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.3e-181876357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_023003193.1 18 KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 76
                    6789*****************************************************97 PP
2START162.82.6e-511673742204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++   +  vi +g  g+++l+
  XP_023003193.1 167 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPM-KVAEILKDRLSWYRDCRCLNVFSVIPTGngGTIELI 260
                     68999*****************************************************.8999999999************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf++ Ry+ +l++g++v++++S++  +  p     s +vRae+lpSg+li+ +++g+s +++v+h+dl+ ++++++lr+l+
  XP_023003193.1 261 YMQTYAPTTLAAaRDFWTMRYTTSLEDGSLVVCERSLTTSSGGPAgppPSTFVRAEMLPSGYLIRACEGGGSIIHIVDHIDLDVWSVPEVLRPLY 355
                     ***************************************998888777899******************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++k++ a+l++ +
  XP_023003193.1 356 ESSKILAQKMTIAALRHIR 374
                     **************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 846 aa     Download sequence    
MALVMHKDSS NQQMDTSKYV RYTPEQVEAL ERVYAECPKP SSLRRQQLIR ECPILSNIEP  60
KQIKVWFQNR RCREKQRKES SRLQSVNRKL SAMNKLLMEE NDRLQKQVSH LVYENGFMRQ  120
QLHSTSGTTT DNSCESVVMS GQPQQQQNPN PQHSNRDANN PAGLLAIAEE TLAEFLSKAT  180
GTAVDWVQMI GMKPGPDSIG IVAVSRNCSG VAARACGLVS LEPMKVAEIL KDRLSWYRDC  240
RCLNVFSVIP TGNGGTIELI YMQTYAPTTL AAARDFWTMR YTTSLEDGSL VVCERSLTTS  300
SGGPAGPPPS TFVRAEMLPS GYLIRACEGG GSIIHIVDHI DLDVWSVPEV LRPLYESSKI  360
LAQKMTIAAL RHIRQIAQET NGEIQYSGGR QPAVLRTFGQ KLCRGFNDAV NGFVDDGWSA  420
MSSDGLEDVT IVINSSANKL PGSQYKTSMY PSFGGVMCAK ASMLLQNVPP ALLIRFLREH  480
RSEWADYGVD TYSAASLKAS PYAVPCARPG GFPSNQVILP LAHTVEHVEF LEVVRLEGLA  540
FSPEDVALAG RDMYLLQLCN GVDENAVGAC AQLVFAPIDE SFADDAPLLP SGFRVIPLDP  600
KTDEPTANRT LDLASTLEVG ANGARSGGEA DLSTYNLRSV LTIAFQFTFE NHLQENVAAM  660
ARQYVRSVVG SVQRVAMAIA PSQLSSNIGL KPLPGSPEAL TLGRWICRSY RIHVGAELLQ  720
ADSQSGDAML KQLWHHSDAI MCCSVKANAS AVFTFANQAG LDMLETTLVG LQDIMLDKIL  780
DEAGRKILCS EFPKIMQQGF TNLPSGICIS SMGRPISYEQ GVAWKVLNDD DSNHCLAFMF  840
INWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein