PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003147.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 203aa    MW: 23024.4 Da    PI: 10.6105
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF991.9e-313584150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+
  XP_023003147.1 35 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 84
                    79***********************************************8 PP
2K-box99.74.3e-33105183884
           K-box   8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 
                        ++e++++ +qqe+akL+ +i nLq+++R++lGe+L+sLs+k+L++Le++Lek++++iRskKnell+++ie+++k+ 
  XP_023003147.1 105 TgsTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGESLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKRV 183
                     135899***********************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTDLLGFGLG KKTTRGERMS DSPQRKMGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE  60
LSVLCDAEVA LIVFSTRGRL YEYANNSVKT TIDRYKKASS NSPNTGSTSE TNTQFYQQEA  120
AKLRVQIGNL QNSNRNMLGE SLSSLSVKDL KSLESKLEKG ISRIRSKKNE LLFAEIEYMR  180
KRVSLISFSF SVHILVVNFG GYE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.19e-76MIKC_MADS family protein