PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003123.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WOX

Protein Properties

Length: 387aa MW: 41851.7 Da PI: 7.1166

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.8	3.3e-17	59	117	3	56
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k XP_023003123.1 59 PRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSK 117 8***************99***********************************98 PP
2	Wus_type_Homeobox	110.7	8e-36	58	119	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R++ k XP_023003123.1 58 XPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSK 119 68**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MASSNRHWPS MFKSKPCNSH HQWQHDINPN LSSSTATCLR SAPYATVGGC EERSPEPXPR 60 WNPKPEQIRI LEAIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKSKL 120 RHIQNSKSNN NHNSQTTTTP LPSPIPPIAT ATITAAAAAT TCSSSSSSDK SSPISAPIKT 180 FSSNSMTQNY LPQLTKELLP EPFFFPVSQT GGGGGGGSSN LSQGFCLSEL CSVVQQVPED 240 GVVGPCTSLL LSEIMNPTEA SKKDLDEDKI TVKLPPPFMN YHPVFTPSTD NILPPTTMST 300 ALTTLPSPSH TIHQGVGEVY GLGQSCVGMS TVFINGVAFE VGSGAFNVRE AFGDEAVLIH 360 SSGQPVITNE WGLTLHSLQH GASYYLI

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MASSNRHWPS MFKSKPCNSH HQWQHDINPN LSSSTATCLR SAPYATVGGC EERSPEPXPR  60
WNPKPEQIRI LEAIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKSKL  120
RHIQNSKSNN NHNSQTTTTP LPSPIPPIAT ATITAAAAAT TCSSSSSSDK SSPISAPIKT  180
FSSNSMTQNY LPQLTKELLP EPFFFPVSQT GGGGGGGSSN LSQGFCLSEL CSVVQQVPED  240
GVVGPCTSLL LSEIMNPTEA SKKDLDEDKI TVKLPPPFMN YHPVFTPSTD NILPPTTMST  300
ALTTLPSPSH TIHQGVGEVY GLGQSCVGMS TVFINGVAFE VGSGAFNVRE AFGDEAVLIH  360
SSGQPVITNE WGLTLHSLQH GASYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	5e-60	WOX family protein