PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003112.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 280aa    MW: 31376.5 Da    PI: 9.3251
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.94.4e-32411831128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...v.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..... 79 
                     lp+G++F+P+d++++ e+L +kv+++k      l   +     ++   +i++++P++Lp  ++++ +  +fF++ +k+y+ g+rk+r+++     
  XP_023003112.1  41 LPAGVKFDPSDQQIL-EHLDAKVKHDKrklhplL---DefiLtLDGEdGICYTHPQNLP-GMRKDGEIRHFFHRPSKAYTAGSRKRRKVQtdkeg 130
                     799**********99.99******9996664432...233222444435**********.566666777******************74444544 PP

             NAM  80 .sgyWkatgkdkevlsk.kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      + +W++tgk+++++ + +g ++g kk+Lv+y   g+++k++kt+W+mh+y+l
  XP_023003112.1 131 tDTRWHKTGKTRPIIGAdGGVVMGFKKILVLYsnYGSERKPQKTNWIMHQYHL 183
                     4677***********98677889*********65579999***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MNWLNPNEGG LRDAFPSIIC PSCAHPIRFQ RQGGFEGWGR LPAGVKFDPS DQQILEHLDA  60
KVKHDKRKLH PLLDEFILTL DGEDGICYTH PQNLPGMRKD GEIRHFFHRP SKAYTAGSRK  120
RRKVQTDKEG TDTRWHKTGK TRPIIGADGG VVMGFKKILV LYSNYGSERK PQKTNWIMHQ  180
YHLGVTEHEK DGQLVASKVF FQKQPRQSSL THQNSIVKQW SGGDGGYSPD TSAVFVDYGN  240
PMMSSLFEIG GGEKVHREFV LGEGEASSSV VVSGCTFNPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.12e-95NAC family protein