PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003004.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 452aa    MW: 50629.1 Da    PI: 6.3454
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS310.15.1e-95534491373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl..fsevsPilk 92 
                     +++lL++cA+a++s+d++laq++L+ l+++a+pdgd++qRla+ f++AL +r a+  + ++ +a+++ +t+++ ++++++ + l  f++++P+++
  XP_023003004.1  53 MEHLLVHCANAIESNDATLAQQILWVLNNIATPDGDSNQRLASAFLRALVTRAANiGSCKILAAISTAATPSSLTTHSFSLMDLaaFVDLTPWHR 147
                     579****************************************************5455777788777777666555555555566********* PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvl. 181
                     f++ taN aIl+a+eg +++H++Df++++++Q p+L++a+a+R e pp l++T+v+ ++ +      + ++ee+g +L +fA++ +v++ef+++ 
  XP_023003004.1 148 FGFTTANAAILDAIEGYSALHVVDFSLMHCMQIPTLIDAIATRFEFPPLLKLTTVVVAAVKhappmLELSYEELGAKLVNFARSKNVSMEFRFVe 242
                     *****************************************************999876667888788899**********************98 PP

            GRAS 182 ......vakrledleleeLrvkp..gEalaVnlvlqlhrll..........desvsles.....erdevLklvkslsPkvvvvveqeadhnsesF 253
                            ++ ++++++++L   p  +Eal+ n++++lh+++          +            +r+ +Lk ++sl+P +v++v++ead ++++ 
  XP_023003004.1 243 scythgFSNLIQEIRVQNLIYGPesKEALILNCHMMLHYIPeetlnpnpspN------FdmsssTRSMFLKEIRSLEPAIVILVDEEADFTASKM 331
                     8754444445555566666554499****************55555555331......0223346889*************************** PP

            GRAS 254 lerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg 348
                     + r+ +a++y +  +ds+++ lpr+s++r ++E+  + r+i+nv+a eg er+er e + +W +r+ ++ F+ v ++++a++++k++l +++  g
  XP_023003004.1 332 VSRLRSAFNYLWIPYDSMDSILPRNSKQREWYEAG-ICRKIENVIAEEGIERVERLEPKTRWVQRMVNSKFRGVGFGDDAVSEVKTMLDEHA-AG 424
                     ***********************************.********************************************************.99 PP

            GRAS 349 yrveeesgslvlgWkdrpLvsvSaW 373
                     + +++e++ l+l+Wk++ +++++aW
  XP_023003004.1 425 WGLKKEDDHLLLTWKGHDVLFATAW 449
                     9************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MIRFTHTPPS SHQTMNNQSP ITVPRRRPWP GLFASSSSSK ALGTWLGEDA NCMEHLLVHC  60
ANAIESNDAT LAQQILWVLN NIATPDGDSN QRLASAFLRA LVTRAANIGS CKILAAISTA  120
ATPSSLTTHS FSLMDLAAFV DLTPWHRFGF TTANAAILDA IEGYSALHVV DFSLMHCMQI  180
PTLIDAIATR FEFPPLLKLT TVVVAAVKHA PPMLELSYEE LGAKLVNFAR SKNVSMEFRF  240
VESCYTHGFS NLIQEIRVQN LIYGPESKEA LILNCHMMLH YIPEETLNPN PSPNFDMSSS  300
TRSMFLKEIR SLEPAIVILV DEEADFTASK MVSRLRSAFN YLWIPYDSMD SILPRNSKQR  360
EWYEAGICRK IENVIAEEGI ERVERLEPKT RWVQRMVNSK FRGVGFGDDA VSEVKTMLDE  420
HAAGWGLKKE DDHLLLTWKG HDVLFATAWV PC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-157GRAS family protein